Pairwise Alignments

Query, 231 a.a., General secretion pathway protein J from Sphingobium sp. HT1-2

Subject, 221 a.a., type II secretion system protein GspJ from Vibrio cholerae E7946 ATCC 55056

 Score = 75.1 bits (183), Expect = 1e-18
 Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 11/182 (6%)

Query: 25  GFTLIELLVALMIFAMLAAAGVLLLGNSVSAQAQVKA-RLDDMAAIQRAAGALSADLGQA 83
           GFTLIE+LVA+ IFA L+     +L N V    ++ A R   +A +QRA   + AD  Q 
Sbjct: 15  GFTLIEVLVAIAIFASLSVGAYQVL-NQVQRSNEISAERTARLAELQRAMVIMDADFRQM 73

Query: 84  VPRISRTEAGTLAPAFWAHRDG---EEQPVMQFVRGGWDN-LGDLPRPSLQKVEYWVRQG 139
             R  RT+    +      ++     +Q  + FVR GW N     PR  + KV Y + + 
Sbjct: 74  ALRQFRTDGEAPSEQILQWKESLLDSDQHGLLFVRLGWHNPQQQFPRGEVAKVGYRLFEN 133

Query: 140 RLERRGYAQIDGAAGDEP--AALLDHVEEVTLRFRDGEGEWREEWTPGQPDLMPRAVEMV 197
           RLER  +   D  AG +   + LL  VE+  ++F   +GEW +EW P   + +P AV++ 
Sbjct: 134 RLERVWWRYPDTPAGQQGLISPLLTGVEDWAVQFY-LQGEWSKEWVP--TNALPEAVKVT 190

Query: 198 VK 199
           ++
Sbjct: 191 LR 192