Pairwise Alignments

Query, 246 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 240 a.a., two-component system response regulator OmpR from Vibrio cholerae E7946 ATCC 55056

 Score =  145 bits (366), Expect = 7e-40
 Identities = 88/244 (36%), Positives = 134/244 (54%), Gaps = 6/244 (2%)

Query: 1   MQNSHILLADDDAALLTSLSDYFGRYGFDVDTAANLADMRRLSEEGHYDLLIAEPMMPGQ 60
           ++N  +L+ DDDA L   L  Y    GF V + AN   M RL    ++ L++ + M+PG+
Sbjct: 2   VENHKVLVVDDDARLRALLERYLSEQGFQVRSVANGEQMDRLLTRENFHLMVLDLMLPGE 61

Query: 61  HTAGLLREFAFERR-IPVIIHSRASSDIDRILGLEMGAEDYLTKPCNARELLARANAALR 119
               + R        IP+++ +    +IDRI+GLE+GA+DYL KP N RELLAR  A LR
Sbjct: 62  DGLSICRRLRNSNNMIPILMLTAKGDEIDRIVGLEVGADDYLPKPFNPRELLARIKAVLR 121

Query: 120 ARRRQADAGTMATAPRDNSWVAFQGWRFDLTTRQLFDPSGGTISLSEGEYQLLRVFVANA 179
            +  +A     A    + + + F  +R +L TR++F      + L+ GE+ +L+  V NA
Sbjct: 122 RQVIEAPGAPSA----EETIIEFGEFRLNLGTREMFRGEEA-MPLTSGEFAVLKALVTNA 176

Query: 180 RQVLNRHQLLDQVYGASSDHYDRAIDVQLCRLRRKLSAGGLKGQTIRTVRNEGYIFVHPV 239
           R+ L+R +L++   G      +R+IDVQ+ RLRR L     K + I+TV   GY+FV   
Sbjct: 177 REPLSRDKLMNMARGREYSAMERSIDVQISRLRRMLEVDPSKPRYIQTVWGLGYVFVPDG 236

Query: 240 TAGN 243
            A N
Sbjct: 237 KAAN 240