Pairwise Alignments

Query, 662 a.a., Excinuclease ABC subunit C from Sphingobium sp. HT1-2

Subject, 527 a.a., excinuclease ABC subunit UvrC from Methanococcus maripaludis S2

 Score =  258 bits (659), Expect = 5e-73
 Identities = 176/555 (31%), Positives = 282/555 (50%), Gaps = 44/555 (7%)

Query: 62  LKTLPTRPGVYRMQDARGDVLYVGKARALKNRVANYTQVDRLPNRLRRMVAQTRSMTIVT 121
           +  +P  PG Y  ++  G V+YVGKA+ LK RV++Y        +  ++V     M  + 
Sbjct: 4   ISDIPKNPGCYIYKNESGTVIYVGKAKNLKKRVSSYFNKKNHDPKTEKLVKSIYEMEFIV 63

Query: 122 TNSEAEALLLEAQLIKRYRPPYNVLLRDDKSFPFILLREDHDFPRVQKHRGARKYKGRYY 181
           T++E EAL+LE  LIK+Y P YN+ L+D K++ +I + E+ +FPR+   R   K KG++Y
Sbjct: 64  TDNEVEALILENTLIKKYSPKYNIDLKDSKNYAYIYISEE-NFPRIGISRNKSK-KGKFY 121

Query: 182 GPFASAGSVTRTINALQKLFLLRSCTDSFFANRSRPCLLYQIKRCSAPCVDRIDTAGYAE 241
           GPF SA      ++ L+K F +RSC +       RPCL + IK C+APC   I +  Y  
Sbjct: 122 GPFTSAKERDYVLDVLKKTFKIRSCKNM----HKRPCLRHHIKNCTAPCSGDITSKDYLN 177

Query: 242 LVQDAQDFLGGKSTAVQQKLGAAMEAAAEALDFEQAAMIRDRLKALTFIQGSQAINAEGL 301
            ++ A+  L G   ++  +L   M   ++ L FE+A +IR+ + A+  ++  Q +  +  
Sbjct: 178 QIKKAEHILKGNIDSLIHELKNEMNEKSKNLQFEEALLIREEINAIERLKTRQNVKRDVK 237

Query: 302 GDADIFALAEKGGSMCIQAFFIRGGQNWGHRSFFPVHTNDVATEEVLESFMAQFYEE--V 359
            + D+ ++ EK G + I  F +  G  +  + F         TE   E F+ Q+Y E  V
Sbjct: 238 YNEDVISILEKSGKLHIMVFNVLKGTLFDRKYF-----EFDYTENFFEEFLIQYYSENDV 292

Query: 360 PP-------PKLILTDREPAECELMALALSERLGSKVRIEVPQRGERTRLIKQAQRNAVE 412
           P        PK +  D      + +   LS++ GSKV  ++P++GE+ +L+  A +N   
Sbjct: 293 PSEIIISELPKNLEEDNNEYSSDALLEYLSKKKGSKVAFKIPKQGEKKQLLDLAIKNL-- 350

Query: 413 ALDRRLAETTTQAKILDEMVEAFGLDGVPDRIEIYDNSHIQGAHALGAMVVAGPEGFRKN 472
                +     + K+   +     LD  P+ IE +D SH+ G   +G++V        K 
Sbjct: 351 ----EIYVNGNEIKV-QSLKNKLMLDKSPNIIECFDISHLSGTSTVGSVVQFRNGKPDKK 405

Query: 473 AYRKFNMKNPDISNDDFAMMREMFERRFGRAAREDPDRDGGEWPDLVLIDGGKGQLSAAR 532
            YR+F +K      DDF  + E+  RR+ +   E+      E PDL++IDGGKGQLS+A 
Sbjct: 406 NYRRFKIKTVS-GIDDFKSISEVVFRRYSKLLEENL-----ELPDLIIIDGGKGQLSSAF 459

Query: 533 AMLEDMGIEDVCMIGIAKGPHHGRDGREVFHLMDGREVSFPI--NHPLLFYMQRLRDEAH 590
           + L  + ++ + +I IAK        RE      G E   PI  N     ++Q +RDEAH
Sbjct: 460 SELRKLKLK-IPLISIAK--------REEEIYTPGIENPLPIKKNEKASLFIQEIRDEAH 510

Query: 591 RFAIGAHRAKRSKAI 605
           RFAI  +R  R K +
Sbjct: 511 RFAINYNRLLRKKEL 525