Pairwise Alignments

Query, 282 a.a., Efflux ABC transporter, permease protein from Sphingobium sp. HT1-2

Subject, 262 a.a., ABC-2 type transporter (RefSeq) from Shewanella loihica PV-4

 Score =  134 bits (336), Expect = 3e-36
 Identities = 73/257 (28%), Positives = 143/257 (55%), Gaps = 2/257 (0%)

Query: 25  IRNVNWAGMRALYRKEVRRFMKVQLQTIWAPAVTTLMFLVIFTIALGGANRQVLGVPFAD 84
           +++V +   +++  KEV RF ++ +QT+  PA++  ++ +IF   +G    ++ GV + +
Sbjct: 7   MKHVYFTAFKSILIKEVTRFTRIWVQTLVPPAISMTLYFLIFGNLVGKRIGEMGGVSYME 66

Query: 85  FIAPGLMMMGMMNNAFANSSFSLLAGKMQGTLIDYLMPPLSVGELLLALVGAAVTRAVAV 144
           FIAPGL+MM ++  +++N + S  + K Q  L + ++ P+    ++   VG  V R + V
Sbjct: 67  FIAPGLIMMSVITASYSNVASSFFSAKFQRNLEELIVAPVPHYVMIAGYVGGGVARGLCV 126

Query: 145 GLALWGAMALWPGVHVTPTHLWAVIWFGLMGASLTAFIGVMTSIWAEKFDHAAAITNFVI 204
           G  +      +  V ++  H   V    L+ + L A  G++ +++A+ +D  + +  FV+
Sbjct: 127 GTIVTLVAMFF--VDISLHHAGLVALTVLLTSILFALGGLINAVFAKSYDDISIVPTFVL 184

Query: 205 GPMTLLSGTFYSIDRLSPLFRAISHANPFFYAISGFRYGFVAAADGNVLVGSVVLLALNA 264
            P+T L G FYS+  L   ++ +S  NP  Y I+ FRYGF+  AD ++ +   +++   A
Sbjct: 185 TPLTYLGGVFYSLTLLPSFWQGVSQLNPVVYMINVFRYGFLGYADISIGLSVAIMVGFCA 244

Query: 265 GLAVLCYVLLRKGWKLK 281
           GL ++ Y L+ +G  L+
Sbjct: 245 GLWLVAYYLISRGIGLR 261