Pairwise Alignments

Query, 714 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 737 a.a., chain-length determining protein from Vibrio cholerae E7946 ATCC 55056

 Score =  194 bits (492), Expect = 2e-53
 Identities = 167/727 (22%), Positives = 309/727 (42%), Gaps = 83/727 (11%)

Query: 37  RVILFVTMALCVLAGVIYILLSTPDYRATASVEVEDVPAGAAGAGAMQKPVSAADTESMM 96
           R++LF  M   +   ++++L    +Y A A++ +E   A A       + V   DT+S  
Sbjct: 27  RILLFSVMVTAIT--LLFVLSMRSEYTARATILIESTQAKAVSI----EEVYGLDTKSQE 80

Query: 97  Q--TELEVLRSRALAEDVARDLALVGSPVFFQGMDARRPAQGQGSLTQRQVE-------- 146
              T++E+L+S  +A++V   L L   P F    D    +    SL +R VE        
Sbjct: 81  YYLTQIEILKSDTIAQEVIERLDLASDPEF----DLSPESDASPSLKERLVEWMPFLQGF 136

Query: 147 ----------------HEQVIKLLRDNLQVELPGKSRVLRISFVSADPALSARVANSYAD 190
                           +  ++   +  +++    K++++ I + + DP L+A++AN  A 
Sbjct: 137 KQEETVADPDLEAYRQNRLILYKFKRGMEISPIRKTQLVNIYYTAGDPKLAAKIANEIAR 196

Query: 191 SLIRADLKRGFESGVQARRFLLGELDGARKDLERAERDLAVYASRTGAVPAEAATDEDKK 250
             + + L+   E  ++A  +L   ++  R  L  +E  L  +    G V  +        
Sbjct: 197 VYMDSHLEAKLEVELKANTWLNTRMEELRTQLRESEAKLQAFLQAEGLVDVQGV------ 250

Query: 251 SDGKDAKPDAAPVPEGSTAARLAQLNAFRAQAVADRIAAQKRWESAKAASAE-------- 302
                         EG     L +L +   +A   R+AA+  ++ A + S          
Sbjct: 251 --------------EGLATQELEELTSQMNKARDRRVAAETLYQVANSYSKNDSDLTALS 296

Query: 303 TLPEVLGNGAMQQLMAERAQARAALVEERQFRKDAHPEMREARARLAALDDQAESMANTI 362
           ++PE+  +  ++ L      A   + E  +     HP+++ A A+L A+     +    +
Sbjct: 297 SIPEISNHPTIRDLKVAEVDAERKVSEFSKRYGPKHPKLKSASAQLEAVRKNLRAELRQL 356

Query: 363 RASLRQEYEVAAHGEKQIASEIAALEGDARVERGRDMQMSMMSRSVETYRLLHDSLLQRY 422
              +  E + A   E+ + +E    + + +    ++ + S + R V+T R L D  L R 
Sbjct: 357 LNGINNELQAAKQSERSLQTEFNQRKSEFQTLTVKNAKYSELKREVQTNRELFDLFLARQ 416

Query: 423 RDMASQAGFQAGRIQPLDRAAVPTTPFAPHAGQIMLVALFGGMLLGLLLIAARHMFDDAV 482
           ++ ++   F     +  D+A+ P TP  P+   I+L+A         ++        D  
Sbjct: 417 KETSASGDFNTTIARFTDQASAPLTPSKPNKKLIVLLAFVVSFGFACVVAFIADAMTDTF 476

Query: 483 TSADTLAERVDLPLLGAVPTTGDQPSAPDIFA--------------PIAASLQLASVAGL 528
                + +++ L LLG VP    Q    D  A               I  S  LA V   
Sbjct: 477 ADIKQVEKQLALSLLGVVPVVRKQRGKLDAKAYFDEKLRELTEAVRTIRTSYLLAHVNQD 536

Query: 529 PRSILVTSAQEEEGKSLTVNALARALARLDKKVLVIDADMRRPVQHSLFRVTATR-GISE 587
              +++TS    EGK+ +   LA +LA+++K  L+ID D+R+P     F ++ ++ G++ 
Sbjct: 537 QHVVMLTSCLPGEGKTTSSLNLALSLAQMEK-TLLIDCDLRKPAIAHRFGISGSQPGVTN 595

Query: 588 VLTGQGKVEDLILDSGVAGVSLLPCGAVPPNPAELLSTPALDALLGAVRDRYDTVLIDAP 647
           +L G   +ED +     +G+ +L  G    NP ELLS+     LL  +R RY  ++ID P
Sbjct: 596 LLNGTQSLEDCVYHDEQSGLDILTAGVYASNPLELLSSSKFSELLADLRTRYQRIVIDTP 655

Query: 648 PILGMSDAQLLAAKVQVTLLVVEWGRNHHGGLRVAVERLRRAGGSIVGAVLTKAHGR--- 704
           P L +SD+ +LA  V   +LV++        +R  V +L + G  I G +L + + +   
Sbjct: 656 PCLAVSDSFMLAQYVDSVILVIDANHTRTPVVREVVGKLTQQGSRIDGVILNRLNAKKAS 715

Query: 705 AYDYDYH 711
            Y   YH
Sbjct: 716 RYSGYYH 722