Pairwise Alignments

Query, 316 a.a., Tetrapartite efflux system, inner membrane component FusBC-like from Sphingobium sp. HT1-2

Subject, 666 a.a., membrane protein, putative from Pseudomonas fluorescens FW300-N2E2

 Score =  153 bits (386), Expect = 1e-41
 Identities = 95/257 (36%), Positives = 142/257 (55%), Gaps = 6/257 (2%)

Query: 1   MTFTKLGGNDAL---FTLKAFLSAIMAYYIALRIGLERPYWAIITSYIVAQPLAGAVSSK 57
           +TF  L   D L   F +K  L A +A ++ALR GLE+P WA++T+ IVAQPL+G V  K
Sbjct: 3   ITFQALFAPDRLALQFAIKTVLGAGLALWLALRWGLEQPSWALMTAIIVAQPLSGMVVQK 62

Query: 58  AIFRLFGTVVGALVAIVLVPTLGNVPELLCLALAAWLGLCTYVALLDRTPRAYTFLLAGY 117
            + RL GT+VG ++++V +      P L  LALA WLGLCT  + L R+  +Y+F+LAGY
Sbjct: 63  GLARLVGTLVGTVMSVVFMGLFAQAPWLFLLALALWLGLCTACSTLLRSAWSYSFVLAGY 122

Query: 118 TAGIIALPTVDVPATIFTVASLRTQEIAIGIISATLVHSLVFPRTVSARMMARIDVILAD 177
           T  IIALP +  P  +F  A  R  EI++GI+ AT   +L++P  V  ++  +       
Sbjct: 123 TVAIIALPAISHPLGVFDQAVARCTEISLGIVCATAASALLWPLRVERQLAGQALAAWQS 182

Query: 178 AERWTRDSLTHQQSDVLVARDRRQLATDIHELHQLSAHLPFESSRHRLKAGMLRALETQL 237
             +  R +L     DV   +   ++   I  +     H  FE SR R +A  +  L  +L
Sbjct: 183 GMQAARATLA---GDVQARKGLLEILGRIVAVDAQREHAWFEGSRGRQRARAISGLSQKL 239

Query: 238 CLLLPLASAVEDRVQQL 254
            +LL L+ +V  + +QL
Sbjct: 240 LMLLRLSRSVRRQWKQL 256