Pairwise Alignments

Query, 302 a.a., Transcriptional regulator CidR, LysR family from Sphingobium sp. HT1-2

Subject, 296 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  116 bits (291), Expect = 5e-31
 Identities = 73/291 (25%), Positives = 143/291 (49%), Gaps = 6/291 (2%)

Query: 3   MEFRLLRSFTEVVRCGGFSQAARSLASTQSTISKAVKQLENELGTILLDRSGHRCVMTPA 62
           ME R LR F  V     F+ AA+ L   Q  +S ++K+ E +LG  L  R   +  +T  
Sbjct: 8   MEVRQLRHFVTVAEWESFTLAAQQLHIAQPALSISIKKFEQQLGVTLFKRDERKVALTHE 67

Query: 63  GEVVYRRGIKLLADRDDVLAELDEIRGLQRGVLRLGIPSVGNIKLFAPVVCTYRERYPQI 122
           GEV+     ++L   +D    +DE++G+ +G +RLG PS+     F  ++  ++  +P +
Sbjct: 68  GEVLLEHAKRILQQVNDAQLAVDELKGVVKGEVRLGAPSMMGSYFFPQIIMAFKSHFPNL 127

Query: 123 ELRLIEHGSNQLEKHLRAGDIDIAGILEPQSP-DFEWEPIRSKPIVALLSSVHPLSRCGS 181
           ++ +IE G+  + + L +G++DI  IL    P D   +P+ S  +VA++   H L+    
Sbjct: 128 KMTVIEAGTQSIRRMLLSGELDIGVILNHDLPDDLAADPLLSSQMVAVVGKNHELAERRH 187

Query: 182 LKLTDLRDVPFVLFDLGFRLHGMILNASRKAGFEPTVAVTSSQIDFMIELVSTNVGVAFL 241
           L   +  +   V+F  G+     I    R+  F    +  ++ +  ++ +V     +  L
Sbjct: 188 LTFAEFFEHELVMFKPGYFHRDFIDKVCREHKFTADFSFETNLLPMILSIVKHEYAITAL 247

Query: 242 PSEIVDEKHLQGIVSVPLDEAELAWV-MGHAWRRNAYLSDATVAWMKLMRE 291
             E+V     + + ++P +     W+ +  AWR+  YLS+A   +++ +++
Sbjct: 248 -LELVTSNEPE-VKAIPFEPP--VWLDLALAWRKEGYLSNADRTFIEFVKK 294