Pairwise Alignments

Query, 302 a.a., Transcriptional regulator CidR, LysR family from Sphingobium sp. HT1-2

Subject, 297 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  191 bits (485), Expect = 2e-53
 Identities = 101/290 (34%), Positives = 170/290 (58%), Gaps = 2/290 (0%)

Query: 3   MEFRLLRSFTEVVRCGGFSQAARSLASTQSTISKAVKQLENELGTILLDRS--GHRCVMT 60
           M+ + L  F E+V  GGF++AA  +  +Q  +SK++ QLE EL   LL R   G +  +T
Sbjct: 1   MDLKALHYFVEIVASGGFNRAAERIHISQPALSKSIAQLETELALPLLTRGKRGTKVQLT 60

Query: 61  PAGEVVYRRGIKLLADRDDVLAELDEIRGLQRGVLRLGIPSVGNIKLFAPVVCTYRERYP 120
           P GEVVYR  ++LL D+  ++ EL +++GL RG+L+LG+  +G+ +LFAP++  YR+ YP
Sbjct: 61  PHGEVVYRHALRLLEDKQTMMEELAQLKGLNRGILKLGLAPLGSAELFAPIIAKYRQAYP 120

Query: 121 QIELRLIEHGSNQLEKHLRAGDIDIAGILEPQSPDFEWEPIRSKPIVALLSSVHPLSRCG 180
           +IE +L+  G  +  + L+ G+I++A  +      +E   I ++P+V +L S HPL+R  
Sbjct: 121 EIETQLLVRGGVEQTQALQQGEIELATGIIDLKDRYEGIAIHTEPMVVVLPSEHPLARRS 180

Query: 181 SLKLTDLRDVPFVLFDLGFRLHGMILNASRKAGFEPTVAVTSSQIDFMIELVSTNVGVAF 240
            + L +L     +LF+  F LH M++NA   AG         +Q +F + LV+  +G+  
Sbjct: 181 EIPLGELDGQAQILFESEFSLHEMVINACLHAGVSIKNPTQVNQPEFGVALVAAGIGLML 240

Query: 241 LPSEIVDEKHLQGIVSVPLDEAELAWVMGHAWRRNAYLSDATVAWMKLMR 290
           LP  I +      +++ PL + +L+W M   WR++  LS A  A + L++
Sbjct: 241 LPKFIAERYRPDAVITRPLTQTDLSWQMSLFWRKDLSLSFAAQAMIDLVK 290