Pairwise Alignments

Query, 465 a.a., Chromate transport protein ChrA from Sphingobium sp. HT1-2

Subject, 380 a.a., chorismate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  103 bits (256), Expect = 1e-26
 Identities = 106/428 (24%), Positives = 169/428 (39%), Gaps = 67/428 (15%)

Query: 26  RVWIRVALLSFGGPAGQIAVMHRILVEEKRWIGEERFLHALNYCMLLPGPEAQQLAVYIG 85
           R +  +  +SFGGPA  I       VE+ RW+ E+ +   +     LPGP + Q+   IG
Sbjct: 6   RTFFALGWVSFGGPAAHIGYFRHTFVEKLRWVSEQEYAQFVALSQFLPGPGSSQVGFAIG 65

Query: 86  WLLHKTKGGLVAGALFVLPGFLAILGLSYVYVLLGEVPLVEGLFFGLKAAVLAVVLQAVV 145
           +      G   A   F LP  L +L L+ +   L + PL E +  GLK   + VV  A +
Sbjct: 66  YHRGGLAGAWAAFLGFTLPSVLIMLLLAGLSSHLLDTPLFEQMIHGLKLLAIIVVADACL 125

Query: 146 RVGSRALKNNVMRGFAALAFVAIFVLDVPFPLIVLAAALIGFFSGRAGYAAFKGGGGHGP 205
            +     +  +  G   L  VAI +   P  +   A  LI  F G+A  A          
Sbjct: 126 TMYRNFCQQRLTAGLCVLTAVAITL--APGLITQFAVLLIAAFVGQARLA---------- 173

Query: 206 AGAEIIHDRDTALGEGLPDHARPNLSWSLRISGVLLLLWLGPVAALLFAFGPDDVFSRIA 265
                            P  +    ++S     +LL   L     LL A  P      + 
Sbjct: 174 -----------------PQQSFSTTTFSPSWLSLLLFASLLLGLPLLAASSP---LVELF 213

Query: 266 TFFSQMAVMTFGGAYAVLAYVAQEAVETYGWLQPGEMLDGLGMAETTPGPLIMVTQFVGF 325
             F Q   + FGG + VL  +     ++   L   + L G   A+  PGP+  +  ++G+
Sbjct: 214 GHFFQAGSLVFGGGHVVLPLLQNALGDS---LSTDQFLTGYAAAQAVPGPMFTLATYLGY 270

Query: 326 LAAFREATGLPPLVAATFGAILTTWVTFLPCFLWIFAGAPFIERLRGNRALSAALSAITA 385
           +      T   P+V    GA++ T   FLP FL +         L     ++ A+  + A
Sbjct: 271 V-----LTPEMPVV----GALIATLAVFLPGFLLLLGVLKNWSALAQRPKVAGAMQGVNA 321

Query: 386 AVVGVILNLAVWFGIHTLFEQVREVPFAAGTIDLPVLTSVNWPALALAVGAILAMFRFKA 445
            VVG++L          L++     P  + T+  P    ++W AL      ++  F FK 
Sbjct: 322 CVVGLLL--------AALYQ-----PVWSSTVHAP----LDWAAL------LVGFFLFKV 358

Query: 446 GMLPVLGV 453
             LP++G+
Sbjct: 359 LRLPLIGM 366



 Score = 48.5 bits (114), Expect = 4e-10
 Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 8/161 (4%)

Query: 34  LSFGGPAGQIAVMHRILVEEKRWIGEERFLHALNYCMLLPGPEAQQLAVYIGWLLHKTK- 92
           L FGG    + ++   L +    +  ++FL        +PGP    LA Y+G++L     
Sbjct: 222 LVFGGGHVVLPLLQNALGDS---LSTDQFLTGYAAAQAVPGPMFT-LATYLGYVLTPEMP 277

Query: 93  --GGLVAGALFVLPGFLAILGLSYVYVLLGEVPLVEGLFFGLKAAVLAVVLQAVVR-VGS 149
             G L+A     LPGFL +LG+   +  L + P V G   G+ A V+ ++L A+ + V S
Sbjct: 278 VVGALIATLAVFLPGFLLLLGVLKNWSALAQRPKVAGAMQGVNACVVGLLLAALYQPVWS 337

Query: 150 RALKNNVMRGFAALAFVAIFVLDVPFPLIVLAAALIGFFSG 190
             +   +      + F    VL +P   +V +  L G  SG
Sbjct: 338 STVHAPLDWAALLVGFFLFKVLRLPLIGMVGSTLLFGVLSG 378