Pairwise Alignments

Query, 789 a.a., Signal transduction histidine kinase CheA from Sphingobium sp. HT1-2

Subject, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

 Score =  258 bits (659), Expect = 9e-73
 Identities = 156/417 (37%), Positives = 238/417 (57%), Gaps = 12/417 (2%)

Query: 123 EAPA---APAAEAEPEEPAVPVAA--VRQGQALRTIRLPLSLIDQLMNGVSDMVLARNEL 177
           E PA   APAA  + +E     AA   ++ Q   T+R+  S +D +MN V ++VL RN L
Sbjct: 363 EEPAKAPAPAAVKDSDESREVAAAGGAKKAQTESTVRVDTSTLDTIMNMVGELVLVRNRL 422

Query: 178 SRKLRDRSADPELDSAFERLSTCVADMRDVISKTRMQRVERLFAAMPRMVRDLSRDLDKR 237
              L   S D E+  A   L    AD++  + KTRMQ ++++F   PR+VRDL+R L+K 
Sbjct: 423 L-SLGLNSNDEEMSKAVANLDVVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKE 481

Query: 238 IELSLEGGDVEMDREMVEMVVDPLTHIVRNSIDHGIETPERRRAAGKPEAGRLRLEARQS 297
           I+L L G + ++D+ +VE + DPL H+VRNS+DHGIE P+ R   GK   G++ L A Q 
Sbjct: 482 IDLELRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDERAKNGKSRTGKVILSASQE 541

Query: 298 GNQIVIEISDDGAGINTARLVEKAIAAGRLTPDAAARMTEQDKLDLIFQPGLTTAAKVTA 357
           G+ I + I DDGAG++  +L   A+  G +  DAA R+T ++  +LIF PG ++  K+T 
Sbjct: 542 GDHIQLAIVDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNKECFNLIFMPGFSSKEKITD 601

Query: 358 VSGRGVGMDVVRANIERIGGVIALDNHPGQGLRITLRVPLTLTIIPGLIVRAGGLHFAIP 417
           +SGRGVGMDVV+  I  + G I +D+  G+G +IT++VPLTL I+P L+V   G  FA+P
Sbjct: 602 ISGRGVGMDVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTLAILPTLMVGVAGHPFALP 661

Query: 418 RAAVVEILHDNNEMMQIADVGGAKIATIRSIRHSMIDLEDVLGMDKPQ---QIGPRAVMV 474
            A+V EI H +     + D  G     +R     +  L++ L   K +   + G   V++
Sbjct: 662 LASVNEIFHLDLRRTNVVD--GQLTIIVREKSIPLFYLQNWLAPKKGKVQLRQGHGHVVI 719

Query: 475 VRSATGVPFAMGVSAVENHEELVIRPASPLVMASGVYAGMTLPDNGKPMLLLDAAGL 531
           V+  +     + V  +   EE+VI+P   L+  +   +G T+  +G   L+LD   L
Sbjct: 720 VQIGS-QRVGLVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDGHIALILDVPDL 775



 Score = 85.9 bits (211), Expect = 8e-21
 Identities = 53/140 (37%), Positives = 76/140 (54%), Gaps = 5/140 (3%)

Query: 2   DELLQEFISETQETLEALAGEVVAWEANPGDSQRLDAIFRFFHTVKGSCGFLNLPRFEKL 61
           +++LQ+F+ E  E LE L+ ++V  E NP D   L+AIFR FHTVKG  GFL L    + 
Sbjct: 7   EDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELVET 66

Query: 62  SHAAEDVLSEIRAGNRKPDPATVSAVLAIMDRIGELAEAVARGAALPNENDEYLIGALTQ 121
            H AE+V   +R G R   P+ +  +L  +D + E   AV     L   + E L+  L +
Sbjct: 67  CHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPE-LLDELHR 125

Query: 122 VEAPAA----PAAEAEPEEP 137
           +  PA+     AAEA  +EP
Sbjct: 126 LSKPASEDEDEAAEAHFDEP 145