Pairwise Alignments

Query, 525 a.a., Peptide chain release factor 3 from Sphingobium sp. HT1-2

Subject, 698 a.a., translation elongation factor G (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  148 bits (373), Expect = 7e-40
 Identities = 130/474 (27%), Positives = 207/474 (43%), Gaps = 31/474 (6%)

Query: 7   RTFAIISHPDAGKTTLTEKLLLEGGAIHLAGEVKARGANRRARSDWMKIEQQRGISVTSS 66
           R   I +H DAGKTT TE++L   G  H  GEV     +  A +DWM  EQ+RGI++TS+
Sbjct: 11  RNIGICAHVDAGKTTTTERVLFYTGLSHKIGEVH----DGAATTDWMVQEQERGITITSA 66

Query: 67  -VMTFERTRDGETIT--FNLLDTPGHEDFSEDTYRTLTAVDSAVMVIDAAKGIEPQTRKL 123
            V TF R  D +      N++DTPGH DF+ +  R+L  +D AV+V   A G+EPQ+  +
Sbjct: 67  AVTTFWRGMDAQFTEHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGASGVEPQSETV 126

Query: 124 FEVCRLRNVPIITFVNKVDREGRELFGLLDEVADQLQLDVCPMSWPVGMGGEFEGIYDF- 182
           +       VP I FVNK+DR G +   ++ ++  +L     P+   +G    F G+ D  
Sbjct: 127 WRQADKYRVPRIVFVNKMDRAGADFERVVKQIRTRLGATCVPIQLNIGAEENFTGVIDLI 186

Query: 183 ---ATNRLMQPTGPSKEFDGTRHQFSGLDDP------KLADYLSERGLEKLREEAELAQG 233
              A N      G +  ++      +   +       + A   S+  ++K  EE  L++ 
Sbjct: 187 KMKAINWNEADQGMTFSYEAIPAHLTAKAEEMHEFLVEAAAEASDELMDKYLEEGTLSEE 246

Query: 234 GYAEFDLERYRHGDLTPVYFGSALKLFGVTELIDALSAHAPPPRAQP---------AEPA 284
              +   +R  + ++     GSA K  GV  ++DA+    P P   P          E  
Sbjct: 247 EIKKALRQRTINNEIVLATCGSAFKNKGVQAVLDAVVEFLPAPVDVPPIKGIDDNEQEVE 306

Query: 285 PVEPEGSEVTGFIFKVQANMDPMHRDRIAFMRLVSGKFRRGMKLTPSGSGKALAVHSPIL 344
               + +      FK+    DP     + F+R+ SG    G  +  S   K   +   + 
Sbjct: 307 RPSDDNAPFAALAFKIAT--DPF-VGTLTFIRVYSGVLESGSGVYNSVKQKRERIGRIVQ 363

Query: 345 FFAQDRELADEAFPGDIIGIPNHGALRVGDTLSEKPGLRFTGLPNF-APEILRRVQLKDP 403
             A DR    E   GDI        +  GDTL +           F  P I   V+ K  
Sbjct: 364 MHANDRTELKEVRAGDIAAAIGLKEVTTGDTLCDNDHKVILERMEFPEPVITIAVEPKSK 423

Query: 404 TKTKQLRKALDDL-SEEGVIQVFYPEIGSNWIVGVVGQLQLEVLISRLEAEYKV 456
               ++  AL  L +E+   +V   E  S  ++  +G+L L++++ R+  E+ V
Sbjct: 424 ADQDKMGIALQKLAAEDPSFRVETDEESSQTLISGMGELHLDIIVDRMRREFGV 477