Pairwise Alignments

Query, 321 a.a., ABC transporter, ATP-binding protein from Sphingobium sp. HT1-2

Subject, 308 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  142 bits (357), Expect = 1e-38
 Identities = 95/308 (30%), Positives = 155/308 (50%), Gaps = 20/308 (6%)

Query: 12  YAVEGHALVKAFGDFRAVDGVDIAVPAGTIYGILGPNGAGKTTLLRTLLGIIDPDEGHRT 71
           YA+    +VK FG F A++ +++ V  G+IYG LGPNG GK+T +R L G++ P  G   
Sbjct: 4   YAIHAENVVKQFGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQIK 63

Query: 72  LLGDGAPLR---MAKQVGYLPEERGLYPSMKAYEAIAFMGALRGLPLHVGRERARAMLQD 128
           +LG   P +   +  ++GY+ ++  LY  +   E + F+G + G+     ++R +A L+ 
Sbjct: 64  VLGLSIPKQSELLRLKIGYMTQKFSLYDDLTVQENLQFIGQIFGMNRSTLQQRTQAQLKT 123

Query: 129 YGMGASVEKPIRQLSKGMAQTVQLFGTIVHEPRLIVLDEPFSGLDAMNQEKLEALIRDQA 188
           YG+    ++ +  +S G  Q + L    +H P L+ LDE  S +D  N+ +    + D +
Sbjct: 124 YGLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQLFDLS 183

Query: 189 RKGVTILFSTHVIAHAERLCERIAIVAGGRIRFEGSVSDARDRLPPQVTLRTRLSDGAWR 248
            +G TIL +TH +  AER C R+AI+  G IR      D  ++L  Q+ +          
Sbjct: 184 AQGTTILVTTHYMDEAER-CHRLAIMEAGEIR----ADDEPEKLMQQMGVNVVEIKAPAL 238

Query: 249 RALPTDTL--------AQDG-AWHFALPDDGMEPL--LRALLDGQAGIESLSIERPGLHD 297
           R+L    L        AQ G      +  D ++P+  LR      A  E L++ RP L D
Sbjct: 239 RSLKEKLLNFSQVRSAAQLGIRLRVLVHRDVIDPILWLRHTFPQLAAAE-LTLARPSLED 297

Query: 298 AFVAIAGE 305
            FV + G+
Sbjct: 298 VFVTVTGK 305