Pairwise Alignments

Query, 321 a.a., ABC transporter, ATP-binding protein from Sphingobium sp. HT1-2

Subject, 340 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  130 bits (326), Expect = 6e-35
 Identities = 72/230 (31%), Positives = 122/230 (53%), Gaps = 4/230 (1%)

Query: 10  APYAVEGHALVKAFGDFRAVDGVDIAVPAGTIYGILGPNGAGKTTLLRTLLGIIDPDEGH 69
           A  A++   + K FGD  AV  +D+ V  G IYG LGPNG GK+T +R L G++ P  G 
Sbjct: 5   ADLAIDARGVDKRFGDLLAVAELDLQVQKGHIYGFLGPNGCGKSTTIRMLTGLLTPTRGE 64

Query: 70  RTLLGDGAPLR---MAKQVGYLPEERGLYPSMKAYEAIAFMGALRGLPLHVGRERARAML 126
            ++LG   P +   + +++GY+ ++  LY  +   E + F+  + GL     + +   ++
Sbjct: 65  ISVLGMAIPQQAEALRRRIGYMTQKFSLYEDLSVRENLQFIADIYGLGARESKRKIDELI 124

Query: 127 QDYGMGASVEKPIRQLSKGMAQTVQLFGTIVHEPRLIVLDEPFSGLDAMNQEKLEALIRD 186
             Y + A  ++    LS G  Q + L    ++EP L+ LDEP S +D  N+      + D
Sbjct: 125 DTYHLDAQRQQLAGTLSGGQKQRLGLACACINEPELLFLDEPTSAVDPQNRRDFWEQLFD 184

Query: 187 QARKGVTILFSTHVIAHAERLCERIAIVAGGRIRFEGSVSDARDRLPPQV 236
            + +G +IL +TH +  A+R C ++AI+  G IR +G+     + +P  V
Sbjct: 185 LSERGTSILVTTHYMDEAQR-CHQLAIMESGHIRAKGNPQALLEAMPLHV 233