Pairwise Alignments

Query, 1054 a.a., RND efflux system, inner membrane transporter from Sphingobium sp. HT1-2

Subject, 1065 a.a., NolG efflux transporter from Sinorhizobium meliloti 1021

 Score =  434 bits (1116), Expect = e-125
 Identities = 301/1034 (29%), Positives = 521/1034 (50%), Gaps = 48/1034 (4%)

Query: 10   AIRNPVPPLVLFAALMLAGVVSFLRMDINQNPDISFPMVSVTVSQPGAAPTELETQVTQR 69
            +I +PV   ++   +++ G+ S+ R+ ++  P+   P+V V  +  GA+P  +E+++++ 
Sbjct: 7    SINHPVFATMMMVMILVLGLFSYGRLGVDHYPETDLPVVVVATTYTGASPESVESEISRP 66

Query: 70   VEAAVRGISGVEDITSFASEGQSLTNVQFKIGTPVDRAVNDVKNAVDQIRSDLPDGILEP 129
            +EAA+  I G++ ITS + EG+S+  VQF++      A  +V++ V ++ +  PDG+  P
Sbjct: 67   IEAALNTIGGIDTITSESYEGRSIVVVQFEVDVDSQDAAQEVRDRVARLETKFPDGVATP 126

Query: 130  QVQRIDVDGGPIAYFSAEATDMTLEELSWYVDNTVAKRLLSVSGMAAVRRGGGVSREIRV 189
            QV R   +G  I   +  +T  TL E++      +  RL  +SG+  V   G   R++ V
Sbjct: 127  QVTRYKPEGQAILSVAVSSTSRTLPEITTLATRVINNRLSVISGVGQVSLIGSSERQVLV 186

Query: 190  ILDPARLQAYGVTAAQVNAQLSQVNINAAGGRTEIAGAEQSI-RVLGNARNAHDLGQTQI 248
            ++DP RL AYG+  + V   +   N + A G T I+G  Q I  V G   N     +  +
Sbjct: 187  VVDPDRLGAYGLAVSTVIEAIRGENQDRAAG-TLISGINQRIVTVEGRIANTSGFNRIIV 245

Query: 249  AISGGRTVKLADIADVRDMYAEQRSLALMNGRQVTSFSLEKAKGSSDVTVYDDAMKVLDK 308
            A   G  V L+++A + D  AE  SLA   G+      + K +G++ V V     + +  
Sbjct: 246  AQRNGYPVYLSEVATILDTGAEVTSLANYQGQTTLGLHIVKVQGANTVEVASAVRREVSA 305

Query: 309  LKKENPK--VQFKQLYSSVEYTRGQYHSAMSAMIEGAVLAVVIVFLFLRDWRATMISALA 366
            L  E  K  VQ      +      Q       ++EG VL+V+IVF+FL  WR+T+I+ L 
Sbjct: 306  LNAELTKDNVQLTITRDNSRPIASQVSQVQRTLVEGGVLSVLIVFIFLNSWRSTVITGLT 365

Query: 367  IPLSAIPSFWFMDMLGFTLNGISLLALSLVAGVLVDDAIVEIENIVRHMRMGKSAYQASI 426
            +P+S I +F  +  LGFTLN ++L+ALSL  G+L+DDAIV  ENI RH++MGK   +A++
Sbjct: 366  LPISVIGTFAAIYALGFTLNIMTLMALSLSIGILIDDAIVVRENITRHLQMGKDPVRAAL 425

Query: 427  DAADEIGLAVLATTMAIVAVFLPVALMPGISGQFFIQFGMTVVVSVLMSLAVARLITPMI 486
            D  +EIGLAVL+TT+ IVAVFLPVA M G+ G+FF+QFG+TV V+V++SL V+  + PM+
Sbjct: 426  DGTNEIGLAVLSTTLCIVAVFLPVAFMGGLIGRFFLQFGVTVAVAVVISLFVSFTLDPML 485

Query: 487  AAYFLKAHGEASHGEGWLMDRYMSVLHWSLDQRKAKARRARGGFRNRFVAFFVDHRVWTL 546
            ++ +     + +   G+          W     +  A R R       + F  D+R  T+
Sbjct: 486  SSVWCDPQSQKTAKRGFFGQLIERFDQWF----EGLASRYRS-----VIYFTFDYRKTTI 536

Query: 547  GIGMLAFVATLFAFGTLPMTFQPTINTDFSQVKIETVPGSTLEQTTAITRKVADMLAADT 606
             I +  FV +L     +   F P  +     + +E   G++L+   A   ++   L  + 
Sbjct: 537  AIVLGMFVVSLLLVPRIGTEFLPPPDQGEVSISLEANEGASLDYMAAKVGQIERAL-REF 595

Query: 607  DVVEAAFADIEPTSADIF--------LTLKKTRPMSSVDWERKIAPKFQTIADARVNF-Q 657
            + V + ++ I       F        L     R + + +    I  +   IA   ++  Q
Sbjct: 596  NYVSSTYSTINSGEMRGFNKALVAVQLVHSSQRRLKTAETLGPIRRRLSRIAGLEISVGQ 655

Query: 658  SQSGGGFGRDIIMMYGSDDPELLEKTANQLVHEMAGIRELRAPRVQGDMQRPEIIIKPRL 717
                 G  + + +    D  E L + ++ +   +A I          +  RP + ++ R 
Sbjct: 656  RSEVVGSIKPLQLSILGDGDEELRRISDHITSVLAAIPGATEIESSIEKLRPTLAVRVRR 715

Query: 718  DLAASMGVTTAALSQSIRIATIGDIDQNVAKFSLSDRQI-PIRVALAEDSRKDIATIENM 776
            + A+ +GV+ A +  ++R    GD    ++ ++  D +   + V L    R++ A + N+
Sbjct: 716  EAASDLGVSIATIGDTLRSLVAGDA---ISVWNSPDGETHDVVVRLPAAGRENAAQLRNL 772

Query: 777  PVPT--VSGGSVPLKV----VADISFGAGPTQIRRYNQIRRV-----VVGADLAPGIVTS 825
            P+ T  +     P+ V    VAD+     P QI R +  R +     + G  L   +   
Sbjct: 773  PIATARMDDNGKPIMVLLDQVADVVESTAPAQITRKDLSRDIRISSNIEGRTLGDVVADL 832

Query: 826  QANQKINELPTMKAIKEGRIQGVQKIEAGDSKFQAEMLTNFVIAVFSGIMLVLAVLVLLY 885
            +A     ++P    I  G          GD++   E     + ++   ++ +  +L   +
Sbjct: 833  KAAMTKMDIPVGFRISFG----------GDAENLTESTAYALQSLAMAVIFIYIILASQF 882

Query: 886  KRIMPPFVNLGSLLLAPLGGAIALHIAGQPMSLPVFIGLLMLLGIVAKNSILVIDFALEE 945
               + P   + ++ L+ +G  + L   G  +++   IG++ML+G+V KN+IL++D++   
Sbjct: 883  GSFIQPIAIIMTMPLSLMGVLLGLLFTGSTLNMFSMIGIMMLMGLVTKNAILLVDYSNLG 942

Query: 946  MEKGVPKQEAILDAGHKRAQPIVMTTVAMVAGMVPTALSLSGDAAWRAPMGITVIGGLLL 1005
            + +G   ++++ DAG  R +PIVMTT+AM+ GM+PTAL L    A RAPM   +IGGL+ 
Sbjct: 943  VREGKSLRQSLADAGAVRLRPIVMTTLAMIFGMLPTALGLGEGGAQRAPMAHAIIGGLIS 1002

Query: 1006 STVLTLVIVPAVFS 1019
            ST+L+LV VP V +
Sbjct: 1003 STLLSLVFVPVVLT 1016



 Score = 53.9 bits (128), Expect = 6e-11
 Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 4/154 (2%)

Query: 340  IEGAVLAVVIVFLFLRDWRATMISALAI----PLSAIPSFWFMDMLGFTLNGISLLALSL 395
            ++   +AV+ +++ L     + I  +AI    PLS +     +   G TLN  S++ + +
Sbjct: 864  LQSLAMAVIFIYIILASQFGSFIQPIAIIMTMPLSLMGVLLGLLFTGSTLNMFSMIGIMM 923

Query: 396  VAGVLVDDAIVEIENIVRHMRMGKSAYQASIDAADEIGLAVLATTMAIVAVFLPVALMPG 455
            + G++  +AI+ ++     +R GKS  Q+  DA       ++ TT+A++   LP AL  G
Sbjct: 924  LMGLVTKNAILLVDYSNLGVREGKSLRQSLADAGAVRLRPIVMTTLAMIFGMLPTALGLG 983

Query: 456  ISGQFFIQFGMTVVVSVLMSLAVARLITPMIAAY 489
              G         ++  ++ S  ++ +  P++  Y
Sbjct: 984  EGGAQRAPMAHAIIGGLISSTLLSLVFVPVVLTY 1017