Pairwise Alignments

Query, 390 a.a., CzcABC family efflux RND transporter, membrane fusion protein from Sphingobium sp. HT1-2

Subject, 384 a.a., efflux protein from Sinorhizobium meliloti 1021

 Score =  112 bits (281), Expect = 1e-29
 Identities = 102/339 (30%), Positives = 168/339 (49%), Gaps = 34/339 (10%)

Query: 64  VVSVLTPGQTMVARTVSSTGSLAARVDMPVGVVGEGGMVTRVLVQPGDWVRAGQVLATVE 123
           VV +   G+    R +  +GS+ AR +M +G    GG +T  LV  GD V+ G +LA ++
Sbjct: 44  VVEIAAAGEP---RELHYSGSVRARTEMNLGF-RVGGKITERLVNIGDRVKPGDILARID 99

Query: 124 R-----SVQSEQVNSLAAQVEVQ-RANAKLAQAQLERAKALVGRGFISAADIDQRTATRD 177
                 +V S + N LAA+ +VQ  A AKL      RA+ L  + F S A +DQ T   D
Sbjct: 100 ATDYRLAVTSAEANLLAAEKQVQTTALAKL------RAEQLFTKSFSSQAQLDQATLLYD 153

Query: 178 QAVAQVRVAEAQLAEQRARTGRLDIRAPASGLVLTRTVEPGQIVQAGGGT-LFRMAKDGE 236
           QAV+    A + L++ + +    D++A  +G+V     + GQ+V  G GT +  +A DGE
Sbjct: 154 QAVSTRDAAASSLSQAKNQVSYTDLKADQNGIVTAVNADIGQVV--GTGTPVVTVAVDGE 211

Query: 237 MEMQAQVAEADLATLRAGNSATVTPVG----SNQH--FSGRVWQVSPVVDPQTRQGIARI 290
            E++  V E D+   + G      PVG    SN      G V +VS   D ++R    R+
Sbjct: 212 KEVEIAVPEIDVTEFKPGK-----PVGVRFWSNDMLVLDGHVREVSGSADQRSRTFSVRV 266

Query: 291 AVAYNDAIRPGGFASATITSGSGNTPL--LPESAVQSDAKGSYVYIVNGK-NQVERRDVK 347
           ++  ++ +  G  A+    + S + PL  +P SA+      + V+IV+   + V  R +K
Sbjct: 267 SLPNDERVLLGMTATVEAAAAS-SAPLVSIPLSALSKKDGQNIVWIVDRDFSTVHARPIK 325

Query: 348 VGQVSDTGVAITSGITGAERIVTSAGAFLTVGQKVKPEA 386
           +   +D GV +  G+   + +V +   F+    KV+ +A
Sbjct: 326 LADFADNGVRVVDGLGAGDLVVAAGTQFMAEDLKVRLQA 364