Pairwise Alignments

Query, 509 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 567 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  136 bits (343), Expect = 2e-36
 Identities = 87/265 (32%), Positives = 133/265 (50%), Gaps = 3/265 (1%)

Query: 211 AHLRIERDAEKTRMAQDRRSETLALVGAFRQSVAGVVSAVSAATGELKESAGLLHDLARR 270
           A LR E+ A   R  + +R    A+     +  A VV  V+  T  L  SA  +   A+ 
Sbjct: 269 AELRAEQAAMAERSERQKREALGAMAATVERETAQVVDEVARRTSRLNASAEDMATSAQT 328

Query: 271 ASVGTDETMAAAGQSSASAAVLARRIEQLSESISAIAAAASQQASLGGEAQRVSVAGHEA 330
            S  +D    +A ++ ++A  +A   E+++ SI  I        +L  +A R        
Sbjct: 329 VSASSDSVSTSARKALSNAETVAGAAEEMTASIREILRQMDNTTALTAQAARTGQTAETT 388

Query: 331 MQAMEGRTASITSFADSITEIAARTNLLALNATIEAARAGEVGRGFAVVAGEVKQLANQT 390
           + +++     I   A  I  IA +TNLLALNATIE+ARAG+ G+GFAVVA EVK LANQT
Sbjct: 389 VASLQAAVERIGEVATLIGTIAGQTNLLALNATIESARAGDAGKGFAVVAQEVKNLANQT 448

Query: 391 ASTTGEIQSLASSARQGAGVAQEALSEVAGSVEELAQAAQAIQRAVADQRDATAAIGQSA 450
             +T EI    +  +     A EA+  + G +  + Q + ++  AV +Q  ATA I +S 
Sbjct: 449 GRSTEEITRQIAEVQSATRAAAEAVKAMIGDIRTIDQVSASVASAVREQDQATAEIARSV 508

Query: 451 RDTARDADHMAQRMATVADVARNTE 475
            +TA  +  + +R   + DVAR  +
Sbjct: 509 AETAAASSEVTER---IDDVAREAD 530



 Score = 43.5 bits (101), Expect = 2e-08
 Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 33/232 (14%)

Query: 292 LARRIEQLSESISAIAA-------AASQQASLGGEAQRVSVAGHEAMQAMEGRTASITSF 344
           +AR  +++ E I A+A        AA  +A     A+R      EA+ AM       T  
Sbjct: 244 VARGRDEVGEIIGAVAVFKRNAQEAAELRAEQAAMAERSERQKREALGAMAATVERET-- 301

Query: 345 ADSITEIAARTNLLALNATIEAARAGEVGRGFAVVAGEVKQLANQTASTTGEIQSLASSA 404
           A  + E+A RT+ L  +A   A  A  V      V+   ++  +   +  G  + + +S 
Sbjct: 302 AQVVDEVARRTSRLNASAEDMATSAQTVSASSDSVSTSARKALSNAETVAGAAEEMTASI 361

Query: 405 RQGAGVAQEALSEVAGSVEELAQAAQAIQRA---VADQRDATAAIGQSAR--DTARDADH 459
           R       E L ++  +    AQAA+  Q A   VA  + A   IG+ A    T     +
Sbjct: 362 R-------EILRQMDNTTALTAQAARTGQTAETTVASLQAAVERIGEVATLIGTIAGQTN 414

Query: 460 MAQRMATV------------ADVARNTENLSDRVSSAAAGLSRTAQELQRAT 499
           +    AT+            A VA+  +NL+++   +   ++R   E+Q AT
Sbjct: 415 LLALNATIESARAGDAGKGFAVVAQEVKNLANQTGRSTEEITRQIAEVQSAT 466



 Score = 28.5 bits (62), Expect = 7e-04
 Identities = 32/148 (21%), Positives = 52/148 (35%), Gaps = 12/148 (8%)

Query: 370 GEVGRGFAVVAGEVKQLANQTASTTGEIQSLASSARQGAG-VAQEALSEVAGSVEELAQA 428
           GE+    AV     ++ A   A      +      R+  G +A     E A  V+E+A+ 
Sbjct: 252 GEIIGAVAVFKRNAQEAAELRAEQAAMAERSERQKREALGAMAATVERETAQVVDEVARR 311

Query: 429 AQAIQRAVADQRDATAAIGQSARDTARDADHMAQRMATVADVA-------RNTENLSDRV 481
              +  +  D   +   +  S+   +  A        TVA  A       R      D  
Sbjct: 312 TSRLNASAEDMATSAQTVSASSDSVSTSARKALSNAETVAGAAEEMTASIREILRQMDNT 371

Query: 482 SSAAAGLSRTAQELQRATDLFVAQLEAA 509
           ++  A  +RT Q      +  VA L+AA
Sbjct: 372 TALTAQAARTGQ----TAETTVASLQAA 395