Pairwise Alignments

Query, 502 a.a., AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination from Sphingobium sp. HT1-2

Subject, 507 a.a., ATP-dependent protease from Vibrio cholerae E7946 ATCC 55056

 Score =  374 bits (960), Expect = e-108
 Identities = 218/497 (43%), Positives = 294/497 (59%), Gaps = 8/497 (1%)

Query: 2   VATVSTVAYLGLEARTVEVQCQLVPGLPAFIVVGLPDKAVAESRERVRNAIAAIGLSLPP 61
           +A + + A +G++A  V V+  +  G+P F +VGLP+  V ESR+RVR+AI       P 
Sbjct: 3   LAIIHSRASIGVQAPPVTVEVHISNGMPGFTLVGLPETTVKESRDRVRSAIINSRFEFPA 62

Query: 62  KRITVNLSPADLPKEGSHFDLPIAIALLGAMGVIDAETLAGYIVVGELGLDGRTAPSPGV 121
           KRITVNL+PADLPKEG  FDLPIA+ +L A   I    L  Y  +GEL L G      GV
Sbjct: 63  KRITVNLAPADLPKEGGRFDLPIALGILAASDQIARNKLESYEFIGELALSGEIRGVKGV 122

Query: 122 LLAALHAGEQDLGLVCPAAQGSEAAWAGQVEVVATPDLLSLLNHFKGTAALSPPQPG-AV 180
           L AAL A + +  LV P + G +AA  G     +   LL +     G   LS  Q   +V
Sbjct: 123 LPAALAANQVERCLVVPHSNGDQAALVGVERHKSAQSLLEVCADLCGQQTLSLFQSSPSV 182

Query: 181 EPPIRAADLRQVKGQESAKRALEVAAAGGHNLLMVGPPGAGKSLMASCLPGILPELTPTE 240
           +   +  DL+ + GQ+  KRALE+AAAG HNLL +GPPG GK+++AS L  +LPE++  E
Sbjct: 183 QQVSQTRDLQDIIGQQQGKRALEIAAAGNHNLLFLGPPGTGKTMLASRLCDLLPEMSDEE 242

Query: 241 ALETSMVASVAGTLEGGRISRARPFRNPHHSASMAALVGGGLKARPGEVSMAHLGVLFLD 300
           A+ET+ +AS+          + RPFR PHHS+SMAALVGGG   RPGE+S+AH G+LFLD
Sbjct: 243 AMETASIASLTQQEINQHNWKLRPFRAPHHSSSMAALVGGGTIPRPGEISLAHNGLLFLD 302

Query: 301 ELPEFQRVVLDSLRQPLESGEVSVARANAHVTFPARVQLIAAMNPCRCGHLSDPALACSR 360
           E+PEF+R VLDSLR+PLESGE+ ++RA     FPAR QL+ A+NP   G+        + 
Sbjct: 303 EMPEFERKVLDSLREPLESGEIVISRAQGKTRFPARFQLVGALNPSPTGYYEGSQARAN- 361

Query: 361 APRCASDYQAKVSGPLLDRIDLHVEVQAVTAADLVL-PPPAEGSAEVAARVAAARTLQTR 419
            P+    Y +++SGPLLDR D+ +E+ A+    L       E +A V  RV  AR     
Sbjct: 362 -PQSILRYLSRLSGPLLDRFDMSIEIPALPKGTLANGGDRGESTAAVRQRVWVAR----E 416

Query: 420 RYAGSKVRTNAEVDGERLEDVAGPDEAGRQLLAQAAAAMKLSARGYTRVLRVARTIADLA 479
           R      + NA +    +E      +A  + L  A   + LS R Y R+++VARTIADL 
Sbjct: 417 RMLARSGKVNALLQSREIEQYCPLLKADAEFLESALHRLGLSIRAYHRIIKVARTIADLQ 476

Query: 480 GAEQVGRVHVAEALSYR 496
           G  Q+ R H+AEAL YR
Sbjct: 477 GEAQIARPHLAEALGYR 493