Pairwise Alignments

Query, 231 a.a., SSU ribosomal protein S3p (S3e) from Sphingobium sp. HT1-2

Subject, 211 a.a., 30S ribosomal protein S3 from Methanococcus maripaludis S2

 Score = 74.7 bits (182), Expect = 1e-18
 Identities = 44/172 (25%), Positives = 89/172 (51%), Gaps = 4/172 (2%)

Query: 39  IRQYIMKNLPQAAISKVVIERPAKLCRVSIYAARPGVIIGKKGADIEKLRKKLGA-FTSS 97
           I +Y    L +A  S +  ++     R++++A +PG +IG+KG  +++L + L   ++  
Sbjct: 16  IDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLATEYSVK 75

Query: 98  DVSLNIVEIRKPEIDSKLVAQGIADQLERRVAFRRAMKRAVQSALRLGAEGIKITCGGRL 157
           +  + + ++  P++D  +V   IA  LER + FR+    A++  +  GA+G+ I   G+L
Sbjct: 76  NPQIEVKQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKGVAIIVSGKL 135

Query: 158 GGAEIARVEWYREGRVPL--HTLRANVDYAEATAHTAYGVCGIKVWIFKGEI 207
            G E +R E + +G +        A V+ +   A    G+ G+ V I + ++
Sbjct: 136 SG-ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTVKIMRPDV 186