Pairwise Alignments

Query, 323 a.a., Vitamin B12 ABC transporter, permease protein BtuC from Sphingobium sp. HT1-2

Subject, 347 a.a., transport system permease protein (RefSeq) from Shewanella loihica PV-4

 Score =  152 bits (384), Expect = 1e-41
 Identities = 115/324 (35%), Positives = 177/324 (54%), Gaps = 15/324 (4%)

Query: 8   LLLVAGIASVALGSVTIAPARILSVL------AGGGDMVARAIVIDLRLPRMAIGLLVGA 61
           L L   + +V+ G+  I  A +L VL      A  G + AR I+I+LRLPR+ +  + G 
Sbjct: 26  LTLATPVLAVSFGAAQIGVAEVLEVLLAKLSGADPGGVTAR-ILIELRLPRILLAFIAGF 84

Query: 62  MLGLSGAALQGYLRNPLAEPAVLGVSNAAALGA--VIALYFGL-SELHPMALPLLAIVTA 118
            L L+GA LQ   RNPLA+P + G+S+ A+LGA  VI L  G+   L  + LPL A + A
Sbjct: 85  GLALAGAVLQTVTRNPLADPYLFGISSGASLGAVVVITLLGGVGGALASVGLPLGAFIGA 144

Query: 119 LAAIGALFLLAGPSESPL--TLILAGIAVATLAGAGISLALNLSPNPFAAMEIMSWLMGS 176
             A+  +  L G   +     ++L+G+A++ L GA  SL L  S  P +A  ++ W +GS
Sbjct: 145 SLAVLMVLALCGRDLNTQIERMLLSGVAISFLFGALASLMLYFS-GPQSAASVLFWSLGS 203

Query: 177 LENRSIDHLLLALPCIAVGAALLLYDGRALDALTLGEDGARALGVDLSRARLRLMAGVAI 236
               S   L L    +   +A+LL   R + A+  G++ A  LG+ + R RL  +   ++
Sbjct: 204 FAKASWQMLWLPWLLVLAASAILLLLKRQILAIQAGDETAHTLGIRVQRLRLVSLLLCSL 263

Query: 237 GVGGAVAVTGSIGFVGLIVPHLVRPLTDRSPSALLLPSMLGGAVLLTLADIGVRIIPTSS 296
                VA  G IGFVGL+VPH+VR L      ALLL +++GG  ++ + D+  R + +  
Sbjct: 264 ITAVLVANCGGIGFVGLMVPHMVRLLLP-GRFALLLTALVGGLFMIWV-DVLARCLLSYQ 321

Query: 297 ELKLGVLTAILGVPVFLIHLMRER 320
           EL +G++TA++G   FL  L  +R
Sbjct: 322 ELPVGIITAVIGSLFFLFILGGKR 345