Pairwise Alignments

Query, 719 a.a., Outer membrane component of TAM transport system from Sphingobium sp. HT1-2

Subject, 582 a.a., outer membrane protein assembly factor from Vibrio cholerae E7946 ATCC 55056

 Score = 74.7 bits (182), Expect = 1e-17
 Identities = 97/429 (22%), Positives = 167/429 (38%), Gaps = 56/429 (13%)

Query: 307 LPVEPGPRGTFRTITTSGEKQAFGADHMAVIARFDKGDLYDSRKVDDLRKALVATGLFAS 366
           L  + G R  F   T  G +     + +  +  F +G+ Y   +V +  + L  T  F+S
Sbjct: 188 LHFDSGIRYLFGATTVEGSQ--IDENRVMSLRPFKQGEPYLVSQVGEFNQNLSNTDWFSS 245

Query: 367 VAVDPVQTGEPGPDGTEYVDLHVDQEAGPARRLAGELGYGTGQGFRAEGSWTHRNLFPPE 426
           V V+P  +     +G E + + V        +L   LGY T  G R    W    +    
Sbjct: 246 VFVEPDLSQLD--EGRE-LPIKVTLAPQARNQLETGLGYSTDVGVRGSLKWKKPWVNSQG 302

Query: 427 GALIASVIAGTQEQGVSGTFRRSNAGKRDKTFQAGAGVNHQKYDAYEAFTLGLNASWSRQ 486
            +  +S      EQ ++  ++       ++ ++   G+ H   D  +  +L  N S  R 
Sbjct: 303 HSFDSSFSLSIPEQTITAGYKIPLEDALNEYYRIQYGMKH--LDKRDTESLESNLSLERH 360

Query: 487 STPIFQKRWTYTYGGEILLSNENTTIDESGENKRLTYFIGALPVQVGYDRSNDLLNPTSG 546
                   W  T     LL N    + +                    D S  LL   + 
Sbjct: 361 WQ--LDGGWHRTVFIRYLLENYRQGLQD--------------------DNSQFLLPGMTY 398

Query: 547 FRANLRISPEASLQGNVSPYVRASFDLAGYYPISDSFVLAARTKIGTINGVAR------- 599
            R   R +      G+         D A    +S++ VL  +T    +   AR       
Sbjct: 399 TRTRTRSNSGLLTWGDKQTITLEYGDPA---LLSETRVLRLQTGSSWLRTYARNHRALVR 455

Query: 600 -----------DDVAPSRRIYAGGGGSVRGYGYQELGPKDANNDPIGGRSVNEFAVEGRY 648
                      D ++PS R +AGG  ++RGYGY+ + P+DA+    G + +   ++E +Y
Sbjct: 456 VDGGANLVDEFDQLSPSLRFFAGGDNNLRGYGYKSISPQDASGALTGAKYIATSSIEYQY 515

Query: 649 RF-GNYGVVAFVDAGQVYESQIPQFSDIRYGVGLGGRFYTNFGPFRADIAMPINRQPGES 707
           R  GN+    F+D G  +    P++   + GVG G R+ +  GP R D A  ++  PG+ 
Sbjct: 516 RLTGNWWAAMFMDVGDAFNDN-PEW---KKGVGTGIRWISPVGPIRLDFAWGLDAAPGD- 570

Query: 708 KFALYIGIG 716
           +F ++  +G
Sbjct: 571 EFKIHFTLG 579