Pairwise Alignments

Query, 302 a.a., Transcriptional regulator, LysR family from Sphingobium sp. HT1-2

Subject, 312 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  119 bits (299), Expect = 7e-32
 Identities = 88/302 (29%), Positives = 134/302 (44%), Gaps = 10/302 (3%)

Query: 3   LDDLRSFAQVVRHGGFSAAERATGERKAKLSRRVARLEQVLGVRLIERSTRNLRVTDVGR 62
           L DL +F  VV  G F+AA    G   + LS+ + RLEQ L V+L ER+TR L +T  G+
Sbjct: 10  LPDLATFIVVVNEGSFTAAASKLGVTPSALSKLITRLEQALSVKLFERTTRKLIITQAGQ 69

Query: 63  EIYRQCETIAEGIDATQAIAARARSQISGNLRIACPPGLARYLRTDVFARFLLLYPDVHL 122
           ++Y Q   +         I++   ++ +G L +A P      +       FL  YP + L
Sbjct: 70  KVYDQSLLMVNAAQQAIEISSSEHAEPAGALTVAAPEAFLNSVLQPFVVPFLAQYPHIQL 129

Query: 123 EMHISSQRIDLIQERFDAAFRVDIDTVHDQALTMHQLGRLDRILVAAPAVAAQVAATAI- 181
           ++  +   IDL +   D AFR  +    D+ L + +L + + +L A+P   AQ   T I 
Sbjct: 130 KLRAADGDIDLFKHNIDVAFR--LTDKPDENLVLRELCKTNLVLCASPEYLAQ-RGTPIH 186

Query: 182 -ASLADLPTLSVGEHVEHDEWLLMNGQGRQHVVAHHPRFCSNDSATVRDAAVAGLGVALL 240
              LA+   L + E  +   W    G+   H VA   R+  N S          LG+ + 
Sbjct: 187 PTDLAEHDCLYLAETDKDHIWTFAKGR-ETHTVAVSGRYAVNQSQLRLTGVKNHLGIGIF 245

Query: 241 SSAACSVELQQGRLVHVLPDWRTS---EGIVHVLFTARTGMSPTLRAFIDYVAESF-PSL 296
                   L  G++V VL +W       G + + +     M   LR FID+V E   P L
Sbjct: 246 HDFVVQDALAAGKVVQVLQEWNIKSNYHGAIAMQYAQTKYMPARLRVFIDFVLEHLSPKL 305

Query: 297 TG 298
            G
Sbjct: 306 NG 307