Pairwise Alignments

Query, 302 a.a., Transcriptional regulator, LysR family from Sphingobium sp. HT1-2

Subject, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  138 bits (347), Expect = 2e-37
 Identities = 90/290 (31%), Positives = 141/290 (48%), Gaps = 6/290 (2%)

Query: 1   MDLDDLRSFAQVVRHGGFSAAERATGERKAKLSRRVARLEQVLGVRLIERSTRNLRVTDV 60
           M LDDL  F  VV +G +++  + T    A ++RR+  LE  L +RL+ R  R L +T+ 
Sbjct: 9   MKLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEA 68

Query: 61  GREIYRQCETIAEGI-DATQAIAARARSQISGNLRIACPPGLARYLRTDVFARFLLLYPD 119
           G   Y+ C  + E +   T+ I    R   SG +RI+ P  L + +   +F  F+  YPD
Sbjct: 69  GERFYKDCSPLLERLASMTEEITDECRG-ASGRIRISAPSNLTKRMMMPMFNAFMEKYPD 127

Query: 120 VHLEMHISSQRIDLIQERFDAAFRVDIDTVHDQALTMHQLGRLDRILVAAPAVAAQVAAT 179
           +H+E+ +S+Q  DL    +D  FRV      D +L   ++G +  ILVA+P   +     
Sbjct: 128 IHIELMMSNQADDLDPTEWDVIFRV--GPQRDSSLIARKIGEVKDILVASPQYLSSHPQP 185

Query: 180 AIASLADLPTLSVGEHVEHDEWLLMNGQGRQHVVAHHPRFCSNDSATVRDAAVAGLGVAL 239
             A       L  G  +   +W L N QG   V +   RF ++    VR A   GLG+ L
Sbjct: 186 THAEELHQHQLLKGYPLL--KWQLTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITL 243

Query: 240 LSSAACSVELQQGRLVHVLPDWRTSEGIVHVLFTARTGMSPTLRAFIDYV 289
           +        L+ G LV VL DW ++   +++L+  +      +R FID+V
Sbjct: 244 MPDVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFV 293