Pairwise Alignments

Query, 681 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 652 a.a., iron-regulated outer membrane virulence protein from Vibrio cholerae E7946 ATCC 55056

 Score = 57.4 bits (137), Expect = 2e-12
 Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 21/174 (12%)

Query: 29  ALALSLAIASPAFADEGE--GDSIVVTGTSLEETLPQQLSRYGHAIEIVTDTQIRDAAAI 86
           ++ L L  ++ AFA +     +++VVT     + +    +    +I +++   +      
Sbjct: 12  SVTLGLMFSASAFAQDATKTDETMVVTAAGYAQVIQNAPA----SISVISREDLESRYYR 67

Query: 87  DTARALEAVPGLFIRSQSGPFSYVDIALQGSRTKDVLWTMDGIRLNNRLYGGTSPNDTMA 146
           D   AL++VPG+ +   +G     DI+++G  +   L  +DG R  +R    T PN    
Sbjct: 68  DVTDALKSVPGVTV---TGGGDTTDISIRGMGSNYTLILVDGKRQTSRQ---TRPNSDGP 121

Query: 147 A---------SMIERIEVLKGGESLFYGTQAAAGVINVVTRDFSDDLGGQINAS 191
                       IERIEV++G  S  YG+ A  GVIN++TR       G +  S
Sbjct: 122 GIEQGWLPPLQAIERIEVIRGPMSTLYGSDAIGGVINIITRKDQQQWSGNVQLS 175



 Score = 36.2 bits (82), Expect = 5e-06
 Identities = 58/225 (25%), Positives = 86/225 (38%), Gaps = 40/225 (17%)

Query: 446 VLPDASQLYGNDPCCEVGNPNLKPEESLNLNAALGGALAGGAIRWKATYFNRRIIDLLD- 504
           V PD  Q+ G       GNP+LKPE S+N   +L  +  G  +    T F+    D +  
Sbjct: 428 VTPDWGQVSGGGNI--YGNPDLKPETSINKELSLMYS-TGSGLAASLTAFHNDFKDKITR 484

Query: 505 --------TTYDDPAFPDGTYINVRDKVRARGAELELNADLSGGWGLSASYTYSRVRNQG 556
                   T   +      TY    D+    GAE  L+  ++    LS+SYTY+      
Sbjct: 485 VACPANICTAGPNQWGAAPTYRVNIDEAETYGAEATLSLPITESVELSSSYTYTH----- 539

Query: 557 SSVQRDRNPEQYGRAAIVYAPQTGCFGANLS------------ANWVGDVWSTASGFGRM 604
            S Q+  N   +    ++  P+   F ANLS             N+ G       G    
Sbjct: 540 -SEQKSGN---FAGRPLLQLPK-HLFNANLSWQTTDRLNSWANLNYRGKEMQPEGGASND 594

Query: 605 NY--GNYAVVDAGAHLWLDQARRNRFGVNVENLFDKD--YASTGY 645
           ++   +Y  +D G    L      +    V NLFD++  YA  GY
Sbjct: 595 DFIAPSYTFIDTGVTYALTDTATIK--AAVYNLFDQEVNYAEYGY 637