Pairwise Alignments

Query, 401 a.a., RND efflux system, membrane fusion protein from Sphingobium sp. HT1-2

Subject, 398 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score =  114 bits (286), Expect = 4e-30
 Identities = 93/319 (29%), Positives = 143/319 (44%), Gaps = 20/319 (6%)

Query: 79  GNVQAYNSAAIYARTNGYVRRWLADIGDRVRAGQPLAVLDAPDLDQQVAAAQADYQTALA 138
           G +++  S  +   T G +       G  V  G  L  LDA       A  +A+ Q A A
Sbjct: 75  GTLRSNESVVLRPETAGRIASIGFKDGVPVAKGTVLVALDA-------ATQEAELQQAKA 127

Query: 139 NQRLAETTSKRWSAMLAQDAVSRQEADEKAGDLAARTAVSNAALANVKRLKAQQGFTRLA 198
           N  LA T  KR   +LA+  +S+Q  D  A +L  + A    ALA  K  K     TR+ 
Sbjct: 128 NHALAVTNFKRTEELLAKKFISQQSLDTTAANLKVQEAA--VALAEAKLAK-----TRIR 180

Query: 199 APFDGVVTSRSAQIGALVVSGNAAAQPLFTVSDIHRMRIYVRVPQGYSASVRPGMGATLT 258
           APF GVV  R   +G  V  G      L  + DI  +++  R+P+ Y + ++ G    ++
Sbjct: 181 APFAGVVGIREVSVGDYVKEG----ADLINLEDIRTLKLDFRLPELYLSRLQKGQAVEVS 236

Query: 259 LPEYPGRSFNATLTSSSGAVDAQSGAVLVQLQAENPDGALKPGAFAQVSFKVGAGQGNGM 318
           +   P ++F A L +    VDA   A+ ++ + +NP+  L+PG FA+V    G   G  +
Sbjct: 237 VDALPNQAFKAVLDAVDPLVDANGRAISLRARLDNPELKLRPGMFARVRLLFGNRDG-VL 295

Query: 319 TLPGSAILYSNNGPSVAVVGADNRITMKPVAIARDEGATVQIASGLSPNDRIVDTPPDAI 378
            +P  AI+ S  G        + +     V       A V+I SGL+  DRI+      +
Sbjct: 296 MIPEQAIV-SGGGKQTVFRIEEGKAKKVEVKTGLRRNAQVEILSGLAAGDRIITAGQLKV 354

Query: 379 RTGDTVKVQASAPAGGKGA 397
           + G  VK   +AP   + A
Sbjct: 355 QDGSPVKAVDAAPQPAQDA 373