Pairwise Alignments

Query, 1064 a.a., CzcABC family efflux RND transporter, transmembrane protein from Sphingobium sp. HT1-2

Subject, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  353 bits (907), Expect = e-101
 Identities = 265/1067 (24%), Positives = 497/1067 (46%), Gaps = 58/1067 (5%)

Query: 7    VALHRPLTFIVMAILIAIVGILSAARTPVDMFPNIRIPVIAVAFQYAGLSPEDMSGRIVG 66
            V++ RP+  +V+++L+ + G++S  +  V   P+I  PV++V+ +Y G S   +  +I  
Sbjct: 6    VSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQITS 65

Query: 67   PYERVLTTTVNDIEHIESQSLQGIGVIKIYFQPGADIRTATAQVTSISQTVLRQMPPGVT 126
              E  L   ++ I+ I S S  G+  I + F+ G D+ T  + +        R +P    
Sbjct: 66   VLEDQLAG-ISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPEEAD 124

Query: 127  PPLILNYSASTVPILQLALSGKGLSEQQLFDLGQNQIRPQLVTIPGLAMPFPSGGKQRQV 186
             P +   + S    + + LS   +   QL D  +  +  +   I G++    SGG  + +
Sbjct: 125  DPQVFKNNGSGQASVYINLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGGLYKVM 184

Query: 187  QIDLNPLALQSKGLSAQDVGNAIAAQNQINPAGFVKIGATQYSVRLNNAPESIAALNDLP 246
             + + P  +  +G++  D+ +A+  +N  +P G V+  +T  SVR     +S      L 
Sbjct: 185  YVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDFEYLV 244

Query: 247  VK-VVNGATIYMRDVAYVRDGAGPQQNIVHVEGSRSALLTVLKNGSTSTLAIVDGVKQAL 305
            VK   +G  IY++DVA V  GA  + +    +G  +  + ++     + L +   V + +
Sbjct: 245  VKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRVHEEV 304

Query: 306  PKISATLPDTLKILPIGDQSLFVKAAVEGVIHEGAIAAALTSLMILLFLGSWRSTVIIAL 365
             K+   LP   ++    D ++F++ ++  V     I   L  L++ +F+G  R+T+I A+
Sbjct: 305  DKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRATLIPAV 364

Query: 366  SIPLAILAAIAALAMFGQTLNVMTLGGLALAVGILVDDATVTIENINWHLEQGKGVIEAI 425
            ++P+++++A  A   FG ++N++TL  L L++G++VDDA V +ENI  H+E+G+  + A 
Sbjct: 365  TVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEKPLLAA 424

Query: 426  LDGAAQIVTPAFVSLLCICIVFVPMFFLPGVAGFLFVPMALSVVFAMIASFILSRTLVPT 485
              G  ++      + L + +VF+P+ F+ G+ G LF   ++ +  A+I S +++ TL P 
Sbjct: 425  YKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIALTLTPV 484

Query: 486  MAMYLLKPHHVGDEDEHLAGTATSRNPLVSFQRGFEYRFEKVRTSYVGMLHRALGARKPF 545
            +   LLK           A     R     F +  +  F ++ + Y  ++ RA+  R   
Sbjct: 485  LGSKLLK-----------ANVKPGR-----FNQLIDRLFARLESGYRQVVSRAIRWRWAA 528

Query: 546  LIGFMAVVVLSFGLLPFLGSNFFPSVDSGQIAMHIRVPVGARIEDTAARFDQIGREVRKI 605
             +   A +  S+GL+  + +   PS D G I   +R          AA  D + + +  +
Sbjct: 529  PVVIAACIGGSYGLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPL 588

Query: 606  IPADQLGSITDNIGLPVSSINTVYNNSGTIGPQDGDMLIALNKGHRPT---DEFVSQLRR 662
            +    L S   +I  P           G  G Q G +++ L   +  T    E +SQ+R+
Sbjct: 589  LGQGFLKSF--SIQSPAF--------GGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRK 638

Query: 663  ELPRRFPGTTFAFLPADITSQILNFGAPAPIDIQIAGKDAEANRAYAQKLLAKITTIPGL 722
             L        F F+P          G+  P+   + G D    + +A+KL  +    P +
Sbjct: 639  ALAGIPDVRVFPFMPG------FRGGSNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFM 692

Query: 723  ADARIQQPGRAPQLDVDVDRSRVGQYGLTERDVTTSLASSLAGTSQTAPVFFVNPQNGVQ 782
              A I    + P+L V +D+ R  + G++ + ++ +L   L G   T  V     + G +
Sbjct: 693  TGADIDYSEKTPELVVTIDKQRAAELGISVKSISDTLEVMLGGKKVTTFV-----ERGEE 747

Query: 783  YPVVAQAPEYLVGSMSDLSNVPVSGAGASAVQPLGGLATIVRSNTVPV---VSHYNIAPV 839
            Y V  +  E    + +DLS + +  A    V     L T+ R + V     ++HYN    
Sbjct: 748  YDVYLRGDENSFNNAADLSQIYMRTATGELVT----LDTVTRIDEVASAIRLAHYNKQKS 803

Query: 840  LDIFATTQ-GRDLGAVAGDIDRAIKSLKAEE--PKGSTITIRGQYATMNTAFSGLGFGLA 896
            + I A  + G  LG     +D+     KA+E  P   +++  G+        S +    A
Sbjct: 804  VTITANLEAGYTLGQALDFLDQ-----KAQEILPNDISVSYSGESKDFKENQSSVAIVFA 858

Query: 897  GAIILIYLLIVVNFQSWVDPFVIITALPAALAGIIWMLFMTGTTLSVPALTGAIMCMGVA 956
             A+++ YL++   F+S+++P V++  +P  + G    LF+ G  +++ +  G IM +G+ 
Sbjct: 859  LALLVAYLVLAAQFESFINPLVVMLTVPMGVFGGFLGLFVMGQGMNIYSQIGMIMLIGMV 918

Query: 957  TANSILVVSFARERLAELGDATKAALEAGMVRFRPVLMTALAMIIGMGPMALGLGEGGEQ 1016
            T N IL+V FA +      +  KA ++A   R RP+LMTA   + G  P+ +  G G E 
Sbjct: 919  TKNGILIVEFANQLRDRGVEFEKAIIDASARRLRPILMTAFTTLAGSIPLIVSTGAGYES 978

Query: 1017 NAPLGRAVVGGLICATIATLFFVPTVFAFVHSRKAAKANNMEMQPSH 1063
               +G  +  G+  AT+ TL  +P ++  + S       ++E + +H
Sbjct: 979  RIAVGTVIFFGMGFATLVTLLVIPAMYRLI-SGSTQAPGHVEAELNH 1024