Pairwise Alignments

Query, 1064 a.a., CzcABC family efflux RND transporter, transmembrane protein from Sphingobium sp. HT1-2

Subject, 1037 a.a., Acriflavin resistance protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  375 bits (964), Expect = e-108
 Identities = 274/1040 (26%), Positives = 476/1040 (45%), Gaps = 48/1040 (4%)

Query: 9    LHRPLTFIVMAILIAIVGILSAARTPVDMFPNIRIPVIAVAFQYAGLSPEDMSGRIVGPY 68
            + RP+   V+++L+ ++GI +  R  V   P+I   V++V   Y G +PE +   I    
Sbjct: 8    IRRPVFATVLSLLLVVMGIAAMTRLAVRELPDIDSAVVSVTTPYTGAAPEIVDTDITEVI 67

Query: 69   ERVLTTTVNDIEHIESQSLQGIGVIKIYFQPGADIRTATAQVTSISQTVLRQMPPGVTPP 128
            E  +   V+ I  I SQS +G G   I F+ G  +  A   V      V   +P  +  P
Sbjct: 68   ENAVAG-VSGIRTITSQSRRGQGRTVIEFESGVSMDEAVNDVRDAVAKVRGDLPDDIEEP 126

Query: 129  LILNYSASTVPILQLALSGKGLSEQQLFDLGQNQIRPQLVTIPGLAMPFPSGGKQRQVQI 188
             I      + P+++L+L+   ++  +L D     I  +L TI G+A     G +++ +++
Sbjct: 127  RIAKSDTDSDPVMRLSLTSPRMTPIELTDFADRYIVDRLATIDGVAQVDLYGERRQAIRL 186

Query: 189  DLNPLALQSKGLSAQDVGNAIAAQNQINPAGFVKIGATQYSVRLNNAPESIAALNDLPVK 248
             L+  A+ ++ ++ QDV  A+   N   PAG ++  +   +VR      S  A     +K
Sbjct: 187  WLDRRAMAARQVTVQDVEAALRRANVELPAGEIESASRLLTVRAATLLTSPEAFGSTVIK 246

Query: 249  VVNGATIYMRDVAYVRDGAGPQQNIVHVEGSRSALLTVLKNGSTSTLAIVDGVKQALPKI 308
            VV+G  + +RDVA V  G       V VEG  +  + VL+    +T+AI + ++  + ++
Sbjct: 247  VVDGYPLRVRDVARVELGVENDDTTVRVEGRDALTMGVLRQSQANTVAISNRIRAEIDRL 306

Query: 309  SATLPDTLKILPIGDQSLFVKAAVEGVIHEGAIAAALTSLMILLFLGSWRSTVIIALSIP 368
              +LP+ + +    D +LF+  ++  VI    ++  +  ++   FLGS R+T++  ++IP
Sbjct: 307  RPSLPEGMSLEVSSDDALFINRSIHEVILTLGLSGLIVIIVNFAFLGSIRATLVPTVTIP 366

Query: 369  LAILAAIAALAMFGQTLNVMTLGGLALAVGILVDDATVTIENINWHLEQGKGVIEAILDG 428
            +A++     + + G ++N++TL  L L++G++VDDA V +ENI   +E G+  + A   G
Sbjct: 367  VAVIGTFIGILLLGFSINLLTLLALILSIGLVVDDAIVVLENIQRRIEAGEPKLVAAARG 426

Query: 429  AAQIVTPAFVSLLCICIVFVPMFFLPGVAGFLFVPMALSVVFAMIASFILSRTLVPTMAM 488
              Q+      + L +  VFVP+ F+ G  G LF      +  A+  S +++ TL P +A 
Sbjct: 427  TRQVTFAVVATSLTLIAVFVPISFMEGTVGRLFTEFGFVLACAVAISMLVALTLCPPLAA 486

Query: 489  YLLKPHHVGDEDEHLAGTATSRNPLVSFQRGFEYRFEKVRTSYVGMLHRALGARKPFLIG 548
             +L             G A  R           Y F  +   Y   L   LG     L  
Sbjct: 487  GVL-----------AEGKAEGR-----LAHALNYAFGTLSRGYQRALSAVLGLPMVVLTV 530

Query: 549  FMAVVVLSFGLLPFLGSNFFPSVDSGQIAMHIRVPVGARIEDTAARFDQIGREVRKIIPA 608
             +     SF L   L     P  D G + + +  P GA    T  +   +   V+ ++  
Sbjct: 531  ALLCGGASFWLYQGLPKELVPVEDRGVVVVSLNGPQGANTRYTDTQIRAVEAAVQPVLDR 590

Query: 609  DQLGSITDNIGLPVSSINTVYNNSGTIGPQDGDMLIAL----NKGHRPTDEFVSQLRREL 664
             +   +   +G         +N      P  G ++I L    N+G R        LR++L
Sbjct: 591  GEAVGVLAQVG--------QWNR-----PHRGYVVIRLDDWENRG-RTASALAESLRKDL 636

Query: 665  PRRFPGTTFAFLPADITSQILNFGAPAPIDIQIAGKDAEANRAYAQKLLAKITTIPGLAD 724
             +    T    +PA +  +    G+  P+ + I G D      +A  LL +   +PGL +
Sbjct: 637  GKLAGATATPVVPAGLGLR----GSRTPLQVVIGGPDYAEVEVWANALLKRAEELPGLIN 692

Query: 725  ARIQQPGRAPQLDVDVDRSRVGQYGLTERDVTTSLASSLAGTSQTAPVFFVNPQNGVQYP 784
              +      PQL V +DR R    G+    +  +L + LA    T  V       G +Y 
Sbjct: 693  PELDFEQNQPQLSVGIDRDRADDLGVGVEAIGQTLQTMLASREVTRFV-----DRGREYQ 747

Query: 785  VVAQAPEYLVGSMSDLSNVPVSGAGASAVQPLGGLATIVRSNTVPVVSHYNIAPVLDI-F 843
            VV QA      + SDLSN  V      A+ PL  L  +  +   P ++ Y   P + +  
Sbjct: 748  VVVQARPEDRRTPSDLSNTFVRAEKGGALVPLDALVILKETAGAPDLNRYARLPSITLQS 807

Query: 844  ATTQGRDLGAVAGDIDRAIKSLKAEEPKGSTITIRGQYATMNTAFSGLGFGLAGAIILIY 903
            A   G D+G     ID  +       P  + +++ GQ         G+ F    A++++Y
Sbjct: 808  ALAPGYDMGQA---IDDVMALASQTVPPEARLSLAGQSKEFLETSGGVLFTFLMALVIVY 864

Query: 904  LLIVVNFQSWVDPFVIITALPAALAGIIWMLFMTGTTLSVPALTGAIMCMGVATANSILV 963
            L++   F+S++ P +I+ ++P A++G +  L+ TG +++V +  G ++ +G+   N IL+
Sbjct: 865  LVLAAQFESFLHPLIIMLSVPLAVSGALLSLWATGNSINVYSQIGIVLLIGLTAKNGILI 924

Query: 964  VSFARERLAELGDATKAALEAGMVRFRPVLMTALAMIIGMGPMALGLGEGGEQNAPLGRA 1023
            V FA +   E     +A LEA  +R RP+LMT +  I+G  P+A   G G E    +G  
Sbjct: 925  VEFANQLRDEGRSVREAILEAASLRLRPILMTVICTILGAVPLAWSSGAGAESREAIGIV 984

Query: 1024 VVGGLICATIATLFFVPTVF 1043
            V+GGL  A++ TLF  P ++
Sbjct: 985  VIGGLGLASLLTLFVTPVLY 1004