Pairwise Alignments

Query, 1064 a.a., CzcABC family efflux RND transporter, transmembrane protein from Sphingobium sp. HT1-2

Subject, 1082 a.a., acriflavin resistance protein (RefSeq) from Shewanella loihica PV-4

 Score =  356 bits (913), Expect = e-102
 Identities = 292/1108 (26%), Positives = 508/1108 (45%), Gaps = 92/1108 (8%)

Query: 2    IGIVKVALHRPLTFIVMAILIAIVGILSAARTPVDMFPNIRIPVIAVAFQYAGLSPEDMS 61
            + I+  ++ RP++  +  + + + G++  +R  V + P++  P I +  QY G +P ++ 
Sbjct: 1    MSIINTSVKRPVSVWMFMLAVILFGMVGFSRLAVKLLPDLSYPTITIRTQYEGAAPVEVE 60

Query: 62   GRIVGPYERVLTTTVNDIEHIESQSLQGIGVIKIYFQPGADIRTATAQVTSISQTVLRQM 121
              +  P E      V  +  I S S  G+  + + F+ G D+  A+ +V     T+  ++
Sbjct: 61   QLVSKPIEEA-AGIVKGLRKISSISRSGMSDVVLEFEWGTDMDMASLEVREKLDTI--EL 117

Query: 122  PPGVTPPLILNYSASTVPILQLALS---GKGLSEQQLFDLGQNQIRPQLVTIPGLAMPFP 178
            P  V  PL+L ++ +  PI++LALS       S +Q+    + +++ QL ++ G+A    
Sbjct: 118  PLDVKKPLLLRFNPNLDPIVRLALSLPDADAQSLKQMRTFAEEELKRQLESLSGVAAVRL 177

Query: 179  SGGKQRQVQIDLNPLALQSKGLSAQDVGNAIAAQNQINPAGFVKIGATQYSVRLNNAPES 238
            SGG +++V I LN   L    L+A  +   IAA+N    AG V  G  +Y VR  N   S
Sbjct: 178  SGGLEQEVHIQLNQEKLTQLNLNADKIRERIAAENINLSAGKVVQGEKEYLVRTLNQFNS 237

Query: 239  IAALNDLPVKVVNGATIYMRDVAYVRDGAGPQQNIVHVEGSRSALLTVLKNGSTSTLAIV 298
            +  L  + V   N   + + +VA + D    + +I  +  + S  L + K G  +T+A+ 
Sbjct: 238  LDELGQIIVYRDNQTLVRLFEVADIIDSHKERNDITRIGSAESIELAIYKEGDANTVAVA 297

Query: 299  DGVKQALPKISATLPDTLKILPIGDQSLFVKAAVEGVIHEGAIAAALTSLMILLFLGSWR 358
              V   L  +   L +  ++  I DQS F+++AV  V     I + L+ L+I LFL    
Sbjct: 298  RKVTAKLNDLKK-LNEKAELKVIYDQSEFIESAVSEVTSAALIGSLLSMLVIYLFLRDIV 356

Query: 359  STVIIALSIPLAILAAIAALAMFGQTLNVMTLGGLALAVGILVDDATVTIENINWHLEQG 418
             T+II++SIP +++A    +     +LN+M+LGG+ALAVG+LVD+A V +ENI+   + G
Sbjct: 357  PTLIISISIPFSVIATFNMMYFADISLNIMSLGGIALAVGLLVDNAIVVLENIDRCRKLG 416

Query: 419  KGVIEAILDGAAQIVTPAFVSLLCICIVFVPMFFLPGVAGFLFVPMALSVVFAMIASFIL 478
               ++A + G  ++    F S +    VFVP+ F+ GVAG LF   AL+V FA++AS ++
Sbjct: 417  MNKLDAAVTGTKEVAGAIFASTMTTLAVFVPLVFVDGVAGALFSDQALTVTFALLASLLV 476

Query: 479  SRTLVPTMAM---YLLKPHHVGDED-----------EHLAGTATSRNPLVSF-------- 516
            + T +P +A    +   PH V   +           +H   T  S   ++ F        
Sbjct: 477  ALTTIPMLASREGFKALPHLVQKREKPVLDTKLAKVKHYGATVCSFPFVLLFSYLPSLLL 536

Query: 517  ---------------------QRGFEYRFEKVRTSYVGMLHRALGARKPFLIGFMAVVVL 555
                                    F + +  +   Y  +L +AL      L   + + + 
Sbjct: 537  TLALMLSRAFSWLAGLIMRPISLAFNWFYHLLEGVYHKLLRQALKFTWVTLAIALTLTLG 596

Query: 556  SFGLLPFLGSNFFPSVDSGQIAMHIRVPVGARIEDTAARFDQIGREVRKIIPADQLGSIT 615
            +  L+P LG    P ++ G+  + + +P G  + +T     ++   ++         S  
Sbjct: 597  TMSLIPRLGMELIPPMNQGEFYVEVLLPPGTEVSETDRVLQKLALSIKDREDVKHAYSQA 656

Query: 616  DNIGLPVSSINTVYNNSGTIGPQDGDMLIALNKGHRPTDEFVSQLRRELPRRFPGTTFAF 675
             + GL  S  +         G ++   L  +   H+  D  V+ + R    R P      
Sbjct: 657  GSGGLMTSDTSR--------GGENWGRLQVVLADHQAFDA-VTHVLRTTAMRIPE----- 702

Query: 676  LPADITSQILNFGAPAPIDIQIAGKDAEANRAYAQKLLAKITTIPGLADARIQQPGRAPQ 735
            L A I    L F    P++I++ G D    +  A  L++ ++     AD         P+
Sbjct: 703  LEAKIQHPEL-FSFKTPLEIEVIGYDLTQLKQTADNLISALSDSDRFADLNTSLRDGQPE 761

Query: 736  LDVDVDRSRVGQYGLTERDVTTSLASSLAGTSQTAPVFFVNPQNGVQYPVVAQAPEYLVG 795
            L +  D +R+   G+    V   +A  + GT  +            QY V  +  + LV 
Sbjct: 762  LSIRFDHARLAALGMDAPTVANRIAQRIGGTVAS------------QYTVRDRKIDILVR 809

Query: 796  S-------MSDLSNVPVSGAGASAVQPLGGLATIVRSNTVPVVSHYNIAPVLDIFATTQG 848
            S       +SD+ ++ ++      + PL  +A +  +     ++  +   V  + A    
Sbjct: 810  SELEERDQISDIDSMIINPNSNQPI-PLSAVADVSLNLGPSAINRISQQRVAIVSANLAY 868

Query: 849  RDLGAVAGDIDRAIKSLKAEEPKGSTITIR--GQYATMNTAFSGLGFGLAGAIILIYLLI 906
             DL     D     +S+  ++   S+I +R  GQ   M  +F  L   L  A+ L+YL++
Sbjct: 869  GDL----NDAVLEARSIIDQQNLPSSIQVRFGGQNEEMEHSFQSLQIALILAVFLVYLVM 924

Query: 907  VVNFQSWVDPFVIITALPAALAGIIWMLFMTGTTLSVPALTGAIMCMGVATANSILVVSF 966
               F+S V P +I+ A+P A+ G I+ LF+T T LSV    G IM  G+   N+I++V  
Sbjct: 925  ASQFESLVHPLLILIAVPMAVGGSIFGLFITQTHLSVVVFIGLIMLAGIVVNNAIVLVDR 984

Query: 967  ARERLAELGDATKAALEAGMVRFRPVLMTALAMIIGMGPMALGLGEGGEQNAPLGRAVVG 1026
              +   +  +   A  EA   R RP++MT +   +G+ PMALGLG+G E  AP+   V+ 
Sbjct: 985  INQLRQQGIEKLSAIEEAAKSRLRPIVMTTMTTALGLAPMALGLGDGSEVRAPMAITVIF 1044

Query: 1027 GLICATIATLFFVPTVFAFVHSRKAAKA 1054
            GL  AT+ TL  +P ++A +  RKA  A
Sbjct: 1045 GLSLATLLTLVVIPALYA-LFDRKAFDA 1071