Pairwise Alignments

Query, 1064 a.a., CzcABC family efflux RND transporter, transmembrane protein from Sphingobium sp. HT1-2

Subject, 1047 a.a., AcrB/AcrD/AcrF family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  341 bits (874), Expect = 2e-97
 Identities = 285/1065 (26%), Positives = 468/1065 (43%), Gaps = 62/1065 (5%)

Query: 6    KVALHRPLTFIVMAILIAIVGILSAARTPVDMFPNIRIPVIAVAFQYAGLSPEDMSGRIV 65
            K  + RP+   V+ I++ ++G++S    P+  +P I  P + V   Y G +   ++  + 
Sbjct: 4    KFFIDRPILANVIGIVLILIGVVSVMLLPISQYPEITPPTVEVKAIYPGSNSLVLADTVG 63

Query: 66   GPYERVLTTTVNDIEHIESQSLQGIGVIKIYFQPGADIRTATAQVTSISQTVLRQMPPGV 125
             P E+ +      +      +  G   + I F  G +I  AT  V +     + ++P  V
Sbjct: 64   APIEQEVNGVEGMLYMSSKSANDGTYTLTITFALGTNIDMATVLVQNRVNVAMARLPDEV 123

Query: 126  TPPLILNYSASTVPILQLALSGKGLSEQQLF--DLGQNQIRPQLVTIPGLAMPFPSGGKQ 183
                +     ST  +  + L+    S   LF  +    +IR +L  IPG+      G   
Sbjct: 124  KRQGVTVKKKSTAILQVVTLTSPDGSYDDLFLSNFASLRIRDELARIPGVGEATVFGAAS 183

Query: 184  RQVQIDLNPLALQSKGLSAQDVGNAIAAQNQINPAGFVKIGAT--------QYSVRLNNA 235
              +++ L+   L+S GL+ +DV NAI+ QN    AG  +IGA         Q++V+    
Sbjct: 184  YSMRVWLDAPRLKSMGLTTKDVVNAISEQNVQVAAG--QIGAQPAPDTQNFQFTVQTQGR 241

Query: 236  PESIAALNDLPVKVVN----GATIYMRDVAYVRDGAGPQQNIVHVEGSRSALLTVLKNGS 291
              ++    D+ ++       G  + +RDVA V  G           G  +AL+ + +   
Sbjct: 242  LSNVEEFEDIIIRTATSGPAGRVVRVRDVARVELGGQTYDLYAQKNGKPAALVIIYQLPG 301

Query: 292  TSTLAIVDGVKQALPKISATLPDTLKILPIGDQSLFVKAAVEGVIHEGAIAAALTSLMIL 351
             + L +   V   +  +    P  +      D + FV+AA+E V H    AA L   +IL
Sbjct: 302  ANALDVAQQVNARMKTLGNDFPQGVAWDVPYDTTRFVEAAIEQVYHTLFEAAVLVLAVIL 361

Query: 352  LFLGSWRSTVIIALSIPLAILAAIAALAMFGQTLNVMTLGGLALAVGILVDDATVTIENI 411
            +FL  WR+T++ A  +P+ IL    A+   G ++N++TL G+ LA+GI+VDDA + +E  
Sbjct: 362  IFLQDWRATLVPASVVPITILGGFMAMMGLGFSVNLVTLFGIILAIGIVVDDAIIVVEGA 421

Query: 412  NWHLEQGKGVIEAILDGAAQIVTPAFVSLLCICIVFVPMFFLPGVAGFLFVPMALSVVFA 471
              H+E G    EA +    Q+  P     L +  VF+P  F+ G+ G L+   AL +   
Sbjct: 422  AHHMEHGDPAREATIKAMMQLFGPIIGITLVLSCVFIPASFMSGITGQLYRQFALVIAST 481

Query: 472  MIASFILSRTLVPTMAMYLLKPHHVGDEDEHLAGTATSRNPLVSFQRGFEYRFEKVRTSY 531
             + S +L+ TL P      LKP                RN   +F RGF   ++ V   +
Sbjct: 482  ALVSALLAATLTPAQCALFLKP------------IVPGRN---AFYRGFNKSYDAVENLF 526

Query: 532  VGMLHRALGARKPFLIGFMAVVVLSFGLLPFLGSNFFPSVDSGQIAMHIRVPVG---ARI 588
            V +L   +   K  ++ F+ ++  +F     L + F P  D G   + +++P     AR 
Sbjct: 527  VTILRTMVRHAKTTMLVFVGLITATFWAFTSLPTGFLPDEDQGYALVAVQLPGAASQART 586

Query: 589  EDTAARFDQIGREVRKIIPADQLGSITDNIGLPVSSINTVYNNSGTIGPQDGDMLIALNK 648
             +   R D I  E + +      G ++      ++  NT  +NS T+     D      +
Sbjct: 587  REVTTRLDAIFSETQGVADWITFGGMS-----ILNGANT--SNSATVFVMYKDW---SER 636

Query: 649  GHRPTDEFVSQLRRELPRRFPGTTFAFLPADITSQILNFGAPAPIDIQIAGKDAEANRAY 708
            G    +  V+ LRR++     G      P  I   + N G    +    A   A+     
Sbjct: 637  GALTQERIVADLRRKVASIQEGMVIVVTPPPIQG-LGNAGGFEMMVQDRAALGAQQLETV 695

Query: 709  AQKLLAKITTIPGLADARIQQPGRAPQLDVDVDRSRVGQYGLTERDVTTSLASSLAGTSQ 768
            A  ++A      GL +       R PQL V+VDR++V  Y +   DV +++ S L  +  
Sbjct: 696  AYSMMAAARGQSGLGNVSTTYNARTPQLFVNVDRTQVKNYDVQLNDVFSTMQSYLGSS-- 753

Query: 769  TAPVFFVNPQN--GVQYPVVAQAPEYLVGSMSDLSNVPVSGAGASAVQPLGGLATIVRSN 826
                 +VN  N  G  Y V  QA      +  D+  + V  A    V PLG +  +    
Sbjct: 754  -----YVNDFNKFGKTYQVRVQADSRYRLTAEDIGRLEVRNAQGGMV-PLGAVTDVKDVV 807

Query: 827  TVPVVSHYNIAPVLDIF-ATTQGRDLG-AVAGDIDRAIKSLKAEEPKGSTITIRGQYATM 884
               VV+ YN+ P   +  A   G   G A+A   D A K+L        T     + AT 
Sbjct: 808  GPDVVTRYNLYPAASLIGAAAPGFSSGQALALMEDMARKTLPQSMGFEWTTMAYQEKATG 867

Query: 885  NTAFSGLGFGLAGAIILIYLLIVVNFQSWVDPFVIITALPAALAGIIWMLFMTGTTLSVP 944
            N AF+  GF    A++L++L++   ++SW  P  II  +P AL G    +   G   +V 
Sbjct: 868  NEAFAVFGF----AVLLVFLVLAAQYESWSAPAAIIMVVPLALLGTSIAVATRGMDNNVY 923

Query: 945  ALTGAIMCMGVATANSILVVSFARE-RLAELGDATKAALEAGMVRFRPVLMTALAMIIGM 1003
               G ++ + +A+ N+IL+V FARE RL +      AA+E    RFRP+LMT+ A I+G+
Sbjct: 924  TQIGIVLLIALASKNAILIVEFARELRLQKGMSIQDAAVEGARARFRPILMTSFAFILGV 983

Query: 1004 GPMALGLGEGGEQNAPLGRAVVGGLICATIATLFFVPTVFAFVHS 1048
             P+    G G      LG AV GG++ +T   + FVP  F  + +
Sbjct: 984  VPLLTASGAGSASQRALGTAVFGGMLASTFLAVLFVPVFFTVIQT 1028