Pairwise Alignments

Query, 934 a.a., TonB-dependent receptor from Sphingobium sp. HT1-2

Subject, 898 a.a., N-acetylglucosamine-regulated TonB-dependent outer membrane receptor from Xanthomonas campestris pv. campestris strain 8004

 Score =  207 bits (528), Expect = 2e-57
 Identities = 241/933 (25%), Positives = 384/933 (41%), Gaps = 131/933 (14%)

Query: 15  ALTLSGAAFAQTDAAPQ-----TIAQDA-PADESA----DIVVTGVRASIVGALNVRKNS 64
           AL L   A  Q  AAP       +AQDA P + S     ++ V G +AS+  ALNV++N+
Sbjct: 45  ALALPALAQQQPAAAPAQPPSPAVAQDAAPTNPSVSTLDEVKVVGYQASLGKALNVKRNA 104

Query: 65  TQIVDSIVSEDVGKLPDNNVIEALQRVTGIQVTNRAGGEAAGISIRGLPDALTT--LNGR 122
             IVD+I +ED+GK PD NV E+L R++GI V +R  GE   +SI G   AL    LNG+
Sbjct: 105 DAIVDAISAEDIGKFPDTNVAESLSRLSGITV-DRQFGEGEKVSILGTDPALNRVLLNGQ 163

Query: 123 NIFTAA---------GQSFSLQDISANLVNRVDVYKTRSADQIETGLAGQVDVQTRRPFD 173
            I + +          +SF+   ++  +V  ++VYKT  A   E  + G V V TR+P +
Sbjct: 164 TIASTSWGGDPNDPDSRSFNYSTLAPEVVGLMEVYKTPEARIDEGSIGGTVIVHTRKPLE 223

Query: 174 FDGFAISGLARGIYNEQADTYNPNVALLVSDRWETGIGDIGILVNGSYTRTKYRDQTV-- 231
            +   ++G     YN++++   PN + L S  W+     +G+L +  +++   R   V  
Sbjct: 224 LERNTLTGTVSYGYNDRSEEGKPNASALYS--WKNQDETLGVLTSVMHSQRVLRRDGVEI 281

Query: 232 -----TAGALVPFAAEAGNGFSRLERIFPGPDNVNWQPGLDRGLPTAAGSTLDINGAQVP 286
                 AGA  P AA  GN       +FP   N                           
Sbjct: 282 FGYDDVAGAGFP-AAVVGNNTG----VFPTSINT-------------------------- 310

Query: 287 YLLSRDAVFSSDLYGKRERPSFNVALQWAPNSSSVYTAEVFYAGYRGETFNSLQFSFVDW 346
                 A+F       R+R   + ALQW P++         Y     + +N  ++ +  W
Sbjct: 311 ------ALFQQT----RKRDGVSAALQWKPDADFELNLTGLYVKESFDNYNQSRYGY--W 358

Query: 347 WGNPGTVETYEGTN-IVKSRTGVADVYGFNSGDFTKSKTDSFVYALNGKWDLGDRGKIVG 405
              PG  +     N I  S T       F  G    S+  +    L   W  GD      
Sbjct: 359 GSTPGDAQALGFENGIATSGTFGDQSTTFLDGYLRNSEVSTGSIHLRADWH-GDGWNASS 417

Query: 406 DLAYQTSKVKSSFIAMRTDRVASSIDVDFNAGGGIPSYHFSDDSLLNDPSIWNVVQMYDN 465
            + Y +S+  +  I     R  +     +N  G   +  +S D         N      +
Sbjct: 418 QVGYTSSQGGAERIYGIQFRNLAGYS--YNIDGRRTAMDYSTDPTNAAAMQLNNASASHS 475

Query: 466 ANRDKGSAITGTLDGYYTWDEGFIRQLKAGIRIDQRKASNAVRTQDRGAPLVATTLAGLG 525
              DK   +    D    W  G   Q+  GI++       +  ++    P   +TLA   
Sbjct: 476 PQYDKERYLQLDFDHAVEW--GPFTQILTGIKLTNHATGQSSYSRTWN-PNDGSTLAAFS 532

Query: 526 EGATFTNK-DFYQGRADVPSSWTLANGYWLHDNADLVRGLYGLPTSDQLSLQKTFDIDES 584
            G T +   D     AD+   W+  N   +      + G  GLP    +S    + I+E 
Sbjct: 533 PGTTPSGYLDGLSTSADM-QRWSTINSGAISQYIGGLEGDEGLP----ISYAGNYSIEEQ 587

Query: 585 TIAMYVQADGEVSIFGRPLKLQAGVRYVTVDTDYNFFDRYNGGAHTGVSQGSD--KWLPS 642
             A ++Q +      G   +   GVRYV      + +    GG +T V+  S   KWLP+
Sbjct: 588 NRAWFLQGN----FSGERYRGNIGVRYVHTRDSTDGYSYAPGGGYTPVNFLSSYGKWLPA 643

Query: 643 FTARYEIFDNLRLRFNYGETLRRPNFGDINPNYSLTGDLTNVGYGSGSAGTASLAPTHSK 702
           F   Y++ D+L +RF   + + RP + ++ P Y  T D T     + S G   L+P  S 
Sbjct: 644 FNIAYDLRDDLIMRFAASKVIARPRYTNMTP-YVATDDTTL----TASTGNPGLSPYEST 698

Query: 703 NFDLALEWYFERNSAITLTGFRREISGLVVPLTVMEYIPNNGIEAGATDYFAITRPVNAS 762
           N   +LEWYF  +S ++   F R+IS  ++  TV + +  N    G++ Y   + P NA 
Sbjct: 699 NLGASLEWYFTDSSVLSGEFFSRDISNYIL-TTVQDRVFFNNATGGSSTY-QTSVPTNAG 756

Query: 763 DGVLKGLELGLTYFPNYLPGPLNGLGFVGSVTVLDSKQNIPLTNSAGEVTGQASSSFFGV 822
           D  ++G+ + L +  N+     NG G V + T  DS       N+ G+ +   +S     
Sbjct: 757 DAKVRGVAVNLQH--NF----GNGFGVVANYTYSDS-------NTDGDYSLPYNSR---- 799

Query: 823 SDLSYNATLAYDNGPIGARLSYIWRKEFLANNEARLFANPIGVWRNPEESLDFQLTWNVN 882
              +YN +  Y+ G   AR++  WR E+               +   + S+ +Q T    
Sbjct: 800 --NAYNISPYYEQGKWSARVNLGWRSEYFTQIGRLNGQQMTDAFTQVDASVGYQAT---- 853

Query: 883 DRLGVTFDAVNLTK--------SKQQTYYKFED 907
           +RL V  +A NL          +K Q YY +++
Sbjct: 854 ERLRVALEATNLLDETYFSYIGNKNQPYYLYKN 886