Pairwise Alignments

Query, 934 a.a., TonB-dependent receptor from Sphingobium sp. HT1-2

Subject, 900 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score = 89.7 bits (221), Expect = 7e-22
 Identities = 87/303 (28%), Positives = 136/303 (44%), Gaps = 29/303 (9%)

Query: 640 LPSFTARYEIFDNLRLRFNYGETLRRPNFGDINPNYSLTGDLTNVGYGSGSAGTASLAPT 699
           LPS    ++I   L+LR     T+  P +GDI  N S   D+T       S     L P 
Sbjct: 618 LPSANFAWDITQALKLRMAGSRTIGLPTYGDIGQNSSPVVDVTGFTINR-SIANPQLRPR 676

Query: 700 HSKNFDLALEWYFERNSAITLTGFRREISGLVVPLTVMEYIPNNGIEAGATDYFAITRPV 759
            S N DL+LEWY +R+S +++  F + I   +V  T  +   + G  +G T     T+ +
Sbjct: 677 RSDNLDLSLEWYPDRDSQLSVALFHKRIDDEIVRTTSTDTQRDPGGLSG-TYQVTTTQAI 735

Query: 760 NASDGVLKGLEL-GLTYFPNYLPGPLNGLGFVGSVTVLDSKQNIPLTNSAGEVTGQASSS 818
           NA    ++G+E   +    ++LPG  + LG + ++TVLD +          E+   A  S
Sbjct: 736 NAGTAQVQGIEFTAIDSRFDFLPGGWSNLGAMLNLTVLDPR--------TAEIQ-MADGS 786

Query: 819 FFGVSDL------SYNATLAYDNGPIGARLS--YIWRKEFLANNEARLFANPIGVWRNPE 870
             G+  L      S NA+L YD GP  AR+S  Y   +   A  + R+       + +  
Sbjct: 787 QRGLPGLMESPKRSANASLLYDVGPFSARISANYTGAQLISAATDNRVNDR----YYDAI 842

Query: 871 ESLDFQLTWNVNDRLGVTFDAVNLTKSKQQTYYKFEDVGGPDQFNLGTTLLSRTFALGVR 930
            S D QL W ++ +L +T    NL+ ++       E     +Q + G     R + LGV 
Sbjct: 843 TSYDAQLAWRLSAQLRLTLQGRNLSNARLTRVIGAEQQLMREQLDNG-----RAYYLGVD 897

Query: 931 YTF 933
           Y F
Sbjct: 898 YAF 900



 Score = 80.1 bits (196), Expect = 6e-19
 Identities = 59/171 (34%), Positives = 86/171 (50%), Gaps = 6/171 (3%)

Query: 12  SLVALTLSGAAFAQTDAAPQTIAQDAPADESADIV-VTGVRASIVGALNVRKNSTQIVDS 70
           SL+AL ++ +  AQ        A    A    D V V+G   SI  A+  ++ +  + D 
Sbjct: 23  SLLALGVAASLSAQAAEPVVAAAGGETAPVQLDAVQVSGQHLSIRQAIGAKREAAVVSDG 82

Query: 71  IVSEDVGKLPDNNVIEALQRVTGI-QVTNRAGGEAAGISIRGL-PDALTTLNGRNIFTAA 128
           + ++D+G +PD  + EALQRV G+  V N   GEA  +S+RG  PD  T L       + 
Sbjct: 83  VAADDIGSIPDFGLGEALQRVPGVSMVVNNGRGEAQFMSLRGFNPDYNTVLIDGVALPST 142

Query: 129 GQS---FSLQDISANLVNRVDVYKTRSADQIETGLAGQVDVQTRRPFDFDG 176
             S    SL  I A+L  +VD+YKT +AD     + G   ++TR  FD DG
Sbjct: 143 ETSRRVQSLDVIPASLAQQVDIYKTFNADMDSNAIGGIAALRTRSAFDHDG 193