Pairwise Alignments

Query, 934 a.a., TonB-dependent receptor from Sphingobium sp. HT1-2

Subject, 943 a.a., hypothetical TonB-dependent receptor (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  153 bits (386), Expect = 6e-41
 Identities = 213/930 (22%), Positives = 359/930 (38%), Gaps = 137/930 (14%)

Query: 31  QTIAQDAPADESADIV---VTGVRASIVGALNVRKNSTQIVDSIVSEDVGKLPDNNVIEA 87
           QT  QD   +   D+    V G + ++  ++N ++ +  ++  + ++ +G  PD+N+ E+
Sbjct: 121 QTTLQDISLNSQDDVEHIRVVGQQGALSKSMNRQRGADNVLSVVSADVLGNFPDSNISES 180

Query: 88  LQRVTGIQVTNRAGGEAAGISIRGL-PDALT-TLNGRNIFTAAG--QSFSLQDISANLVN 143
           LQRV G+ +  R  GE   + +RG+ PD  + ++NG  + +     ++ +L  + ++L+ 
Sbjct: 181 LQRVPGLSI-ERDQGEGRFVRVRGMAPDYNSVSMNGTRLPSPESDRRAVALDVVPSDLLQ 239

Query: 144 RVDVYKTRSADQIETGLAGQVDVQTRRPFDFDGFAISGLARGIYNEQADTYNPNVALLVS 203
            V+V KT + D     L G ++V++   FD D   ++       +   D  NP +A   S
Sbjct: 240 SVEVSKTLTPDMDADALGGAIEVKSLSAFDRDDTYLNLNTEASQDTLTDNINPKLAASYS 299

Query: 204 DRWETGIGDIGILVNGSYTRTKYRDQTVTAGALVPFAAEAGNGFSRLERIFPGPDNVNWQ 263
           D       ++GI +  S+    +    V  G                          +W 
Sbjct: 300 DIIAE---NLGIAIATSWYNRDFGSDNVETGG-------------------------DWA 331

Query: 264 PGLDRGLPTAAGSTLDINGAQVPYLLSRDAVFSSDLYGKRERPSFNVALQWAPNSSSVYT 323
              D G   AA +++D    ++                 RER    V   + P+  +   
Sbjct: 332 FAEDSGFDDAALASVDARDYEI----------------NRERLGVGVNFDYRPSDDTDLY 375

Query: 324 AEVFYAGYRG-ETFNSLQFSFVDWWGNPGTVETYEG--TNIVKSRTGVADVYGFNSGDFT 380
               Y+ +   ET NS +     W          +G  T  +KSRT   ++  F  G  T
Sbjct: 376 LRTLYSEFDDTETRNSAK---TKWKSAQQADALSQGKTTRSLKSRTENQNITSFVLGGQT 432

Query: 381 KSKTDSFVYALNGKWDLGDRGKIVGDLAYQTSKVKSSFIAMRTDRVASSIDVDFNAGGGI 440
           +    +F Y  +      ++ + +    +      + F   +T ++ +  D   NA    
Sbjct: 433 RFDRWTFDYQASHSSASAEKPRDIAGADFVAKIDNTGFSNTQTPQIIAPEDYYQNA---- 488

Query: 441 PSYHFSDDSLLNDPSIWNVVQMYDNANRDKGSAITGTLDGYYTWDEGFIRQLKAGIRIDQ 500
              +F  D           +++  +   D  +A+   L    T  + +  ++K G+++ +
Sbjct: 489 ---NFELDE----------IEIAASKAEDTINAVNVDLTRQLTLGD-YSAEVKTGVKVSR 534

Query: 501 RKASNAVRT---QDRGAPLVATTLAGLGEGATFTNKDFYQGR----ADVPSSWTLANGYW 553
           R  SN        D G   V+     L + A     D+  GR     D    W L N   
Sbjct: 535 RDKSNREDIWIYSDLGDQGVSDDALLLSQYAG-NELDYSLGRFGTGIDSTPVWELVNSLD 593

Query: 554 LHDNADLVRGLYGLPTSDQLSLQKTFDIDESTIAMYVQADGEVSIFGRPLKLQAGVRYVT 613
             DN D V            S    FDI E   A Y+    ++      L++  G+R   
Sbjct: 594 ADDNRDEVE-----------STINDFDITEDINAAYLMGHMDIG----KLRILTGLRVEQ 638

Query: 614 VDTDYNFFDRYNGGAHTGV----SQGSDKWLPSFTARYEIFDNLRLRFNYGETLRRPNFG 669
              D +    Y+G     +    S   D WLP+    Y   DN  LR  +  TL RP FG
Sbjct: 639 NQWD-STGSGYDGAKDEFIDINHSSDEDHWLPALHLTYRYTDNTVLRAAWTNTLVRPTFG 697

Query: 670 DINPNYSLTGDLTNVGYGSGSAGTASLAPTHSKNFDLALEWYFERNSAITLTGFRREISG 729
            + P Y L  D  ++    G+    SL    S N DL+LE YF     I+   F ++I  
Sbjct: 698 QLAPGYLLEEDDGDIDLTFGNPQLKSL---ESMNVDLSLEHYFGNIGLISAGLFYKDIEN 754

Query: 730 LVVPLTVMEYIPNNGIEAGATDYF----AITRPVNASDGVLKGLELGLTYFPNYLPGPLN 785
            +    +          AG  DY     A+T  VN     + GLEL      ++LP P N
Sbjct: 755 FIYQADL----------AGLGDYVDAHSAVTF-VNGDSADIYGLELSYVQEFHFLPEPFN 803

Query: 786 GLGFVGSVTVLDSKQNIPLTNSAGEVTGQASSSFFGV---SDLSYNATLAYDNGPIGARL 842
            L    ++T  DS  NI          GQ  S    +   SDL+ N +L Y+N      L
Sbjct: 804 ALVLNSNLTYTDSSANISWIED-----GQLLSRDIPMPSQSDLTANLSLGYENSYASVWL 858

Query: 843 SYIWRKEFLANNEARLFANPIGVWRNPEESLDFQLTWNVNDRLGVTFDAVNLTKSKQQTY 902
           S  ++ E+L      L    + ++++     DF    ++   + + F  VNLT    + Y
Sbjct: 859 SAAYKSEYL-QEVTELSDERLDLYQDNHLQWDFVAKAHLTSNVTLYFKGVNLT---DEPY 914

Query: 903 YKFEDVGGPDQFNLGTTLLSRTFALGVRYT 932
           Y +    G   +N       RTF LG++YT
Sbjct: 915 YSYT---GNSAYNAQYEAYGRTFQLGLQYT 941