Pairwise Alignments

Query, 934 a.a., TonB-dependent receptor from Sphingobium sp. HT1-2

Subject, 836 a.a., tonB dependent receptor-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  152 bits (383), Expect = 1e-40
 Identities = 212/877 (24%), Positives = 357/877 (40%), Gaps = 138/877 (15%)

Query: 1   MAIRPIALCSASLVALTLSGAAFAQTDAAPQTI-AQDAPADESADIVVTGVRASIVGALN 59
           M  +P +L + + VA   S  A+A   A  + + A+DA   E   I + G R S++ +LN
Sbjct: 2   MRFKP-SLLTLAFVAAGASIHAYAADAATEKDVKAKDA---EIEVIQIKGFRTSVIKSLN 57

Query: 60  VRKNSTQIVDSIVSEDVGKLPDNNVIEALQRVTGIQVTNRAGGEAAGISIRGLPD--ALT 117
            ++    + +SI ++D+G LPD ++ +AL R+ G+    R GG+A+G++IRGL       
Sbjct: 58  DKRFGDTVSESISADDLGALPDQSIADALTRLPGVTAV-RTGGQASGLNIRGLDGDFVFA 116

Query: 118 TLNGRNIFTAAG-QSFSLQDISANLVNRVDVYKTRSADQIETGLAGQVDVQTRRPFDFD- 175
           TLNG    T  G ++       + L+++  VYK+  A  IE G+AG V+++T  P   D 
Sbjct: 117 TLNGHEQVTTGGKRAIEFDQYPSELISQAAVYKSPKASLIEGGVAGTVELKTADPLKSDK 176

Query: 176 GFAISGLARGIYNEQADTYNPNVALLVSDRWETGIGDIGILVNGSYTRTKYRDQTVTAGA 235
             +++  ARG +N++AD         +SD  + G   + +   G +          T G 
Sbjct: 177 DHSVNINARGSFNDRADE--------ISDAEQYG-NRLSLAYQGKFLED-------TLGV 220

Query: 236 LVPFAAEAGNGFSRLERIFPGPDNVNWQPGLDRGLPTAAGSTLDINGAQVPYLLSRDAVF 295
            V        G++ L + +     +  +            +  D+NG  V   +S +   
Sbjct: 221 AV--------GYAHLYQPYVASQFIGLR---------FNDANEDVNGDGVKEAIS-EGFE 262

Query: 296 SSDLYGKRERPSFNVALQWAPNSSSVYTAEVFYAGYRGETF------NSLQFSFVDWWGN 349
                G   R  +  A+ W P  +     ++F++ +  E F       SL+   +    +
Sbjct: 263 LQQKGGDDTRDGYMAAIHWQPTDNFSVKGDLFHSKFTSENFARGFRVKSLKNGTI----S 318

Query: 350 PGTVETYEGTNIVKSRTGVADVYGFNSGDFTKSKTDSFVYALNGKWDLGDRGKIVGDLAY 409
              VE+   T    S  G  +   F   D     ++    + N +W+ G    +  D++Y
Sbjct: 319 DAVVESGSMTGGTVSTDGTDNFAVFVVNDNDSKYSELTSGSFNVEWNNGGALTVAADVSY 378

Query: 410 QTSKVKSSFIAMRT---------DRVASSIDVDFNAGGGIPS-YHFSDDSL------LND 453
             SK    F+   T         + V S+  V +   G  P+   F++D        L +
Sbjct: 379 --SKADGEFVNGGTRAVLYDDIGNEVRSAESVTYKLNGLSPADISFANDYTNTATLGLKE 436

Query: 454 PSIWNVVQMYDNANRDKGSAITGTLDGYYTWDEGFIRQLKAGIRIDQRKASNAVRTQ--- 510
             +W   Q  D         +   LD  Y  D GF+  +  G+R  +R+  NA R+Q   
Sbjct: 437 VGMWPYNQQND--------LVAYKLDFNYALDMGFVSSVDFGVRYAERE-FNAQRSQAGY 487

Query: 511 --DRGA-PLVATTLAGLGEGATFTNKDFYQGRADVPSSWTLANGYWLH-DNADLVRGLYG 566
             + G  P     LA  G+ A     DF    +  PS   +     +   NA L      
Sbjct: 488 GFEYGKNPSNQPVLALNGDMAKVV--DFGGELSGYPSFLAIDFNKAIELVNAQLAATGQS 545

Query: 567 --LPT---SDQLSLQKTFDIDESTIAMYVQADGEVSIFGRPLKLQAGVRYVTVDTDYNFF 621
              PT   S+  ++ ++  ++E  +A YVQA+ +  I    +    GVR V  D      
Sbjct: 546 PFTPTANWSNNWTMIQSGAVNEDVLAGYVQANLDFDIGDIKVTGNLGVRVVNTDQSSTGL 605

Query: 622 DRYNGG----------------AHTGVSQGSDKWLPSFTARYEIFDNLRLRFNYGETLRR 665
            +   G                    V +    +LPS    + + +N +LRF     + R
Sbjct: 606 QQVGYGLGEAITDELGVVSKDYIRNEVGKTYTDYLPSLNLTFHLTENDQLRFAAASVMSR 665

Query: 666 PNFGDINPNY-SLTGDLTNVGYGSGSA-GTAS--LAPTHSKNFDLALEWYFERNSA---- 717
           P    +     S   D    GY   +A G  S  L P ++  +DL+ E +FE +      
Sbjct: 666 PPINKLKSGMGSWYDDSATPGYKKYNAWGNTSPLLDPFYADQYDLSYEHFFEESEGAVVV 725

Query: 718 -------------ITLTGFRREISGLVVPLTVMEYIPNNGIEAGA--TDYFAITRPVNAS 762
                         T+  F  E +G +VP T+++    NG+E      +    T   N  
Sbjct: 726 ALFYKDIKSFINDFTIQPFDFEANGFIVPDTIID----NGVEFPVIKNEGQYQTAINNDK 781

Query: 763 DGVLKGLELGLTYFPNYLPGPLNGLGFVGSVTVLDSK 799
            G ++G+ELG T   ++LP PL+GLGF GS +  DS+
Sbjct: 782 GGYIRGIELGYTQIFDFLPSPLDGLGFTGSYSYSDSE 818