Pairwise Alignments

Query, 216 a.a., Probable transcription regulator protein of MDR efflux pump cluster from Sphingobium sp. HT1-2

Subject, 191 a.a., TetR/AcrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 50.8 bits (120), Expect = 2e-11
 Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 4/188 (2%)

Query: 25  RPREFDPEEALAAALQVFWRRGYEGASLAELTEAMGITKPSLYACFGNKEALFRKALDLY 84
           R  EFD E+ L +A+  F  +G+   S+ +L    G+   S+Y  F NK  L   AL+ Y
Sbjct: 2   RVAEFDREQVLRSAMDEFMSKGFNKTSMQDLKRVTGLHPGSIYCAFENKRGLLIAALEQY 61

Query: 85  ERDKLCYVKSSLEA-PTAKAVAERMLRGSLAIQTGNKDP-QGCMGVISSVGGTAHSECIR 142
            + ++    +   A PT  A  E+ +  ++ +    +D  + C+   +    +   E + 
Sbjct: 62  TKQRVSEFNAIFAAHPTILAGLEQYM--AMVVDECERDEIKDCLLQKALNELSCQDEEVE 119

Query: 143 DEVLARRASSDRALLDRFERAQAEGDLPAGVEPQALACYLSTVIQGMAVQAGAGVPRDRL 202
             + A   +  + +L + + AQ  G++    +   L  YL   I G+   A     +  L
Sbjct: 120 TLIRATVGTWKQGMLAQLQEAQQRGEINPDSDCVLLTEYLVMGIYGLRSFAHTRPEKGLL 179

Query: 203 EQLIDTTL 210
           ++L D  L
Sbjct: 180 KKLADKLL 187