Pairwise Alignments

Query, 216 a.a., Probable transcription regulator protein of MDR efflux pump cluster from Sphingobium sp. HT1-2

Subject, 193 a.a., TetR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 56.2 bits (134), Expect = 4e-13
 Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 9/188 (4%)

Query: 25  RPREFDPEEALAAALQVFWRRGYEGASLAELTEAMGITKPSLYACFGNKEALFRKALDLY 84
           R  EFD  + L  A+  F  +GY   S+ +LT+A G+   S+Y  F NK  L   A++ Y
Sbjct: 2   RNAEFDRAQVLRGAMAAFMHKGYTKTSMQDLTQATGLHPGSIYCAFSNKRGLLIAAIEQY 61

Query: 85  ERD-----KLCYVKSSLEAPTAKAVAERMLRGSLAIQTGNKDPQGCMGVISSVGGTAHSE 139
           ++D     KL +          K   + ++   L+  +     Q C+   +        +
Sbjct: 62  QQDRDEQFKLIFSNGRPVLGNLKTYLDNIVVECLSCDS----QQACLLTKALNEIAEQDD 117

Query: 140 CIRDEVLARRASSDRALLDRFERAQAEGDLPAGVEPQALACYLSTVIQGMAVQAGAGVPR 199
            I++ +         AL  +FE A ++G L   +  +  A YL   I G+   A      
Sbjct: 118 EIQNIISQNLMLWQYALTAQFELADSQGMLHGELNSEQRAQYLMMGIYGLRTFAHTHPQA 177

Query: 200 DRLEQLID 207
           + L+QL D
Sbjct: 178 EILQQLAD 185