Pairwise Alignments

Query, 362 a.a., Flagellin protein FlaA from Sphingobium sp. HT1-2

Subject, 379 a.a., flagellin A from Vibrio cholerae E7946 ATCC 55056

 Score =  175 bits (444), Expect = 2e-48
 Identities = 133/389 (34%), Positives = 187/389 (48%), Gaps = 44/389 (11%)

Query: 4   IGTNSAALRAQRAIEAATKAQGQASEKLSTGKRINSAKDDAAGMAIAQTMTSQLRGMEVA 63
           + TN +A+ AQR +  AT     + E+LS+G RINSAKDDAAG+ I+  +T+Q RG++VA
Sbjct: 5   VNTNVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRGLDVA 64

Query: 64  KRNAADAISLTQTAEGILGEVQNSLQRMRELTLQAANGVNRPEDRAALQTEMDQTVAQIN 123
            RNA D IS+ QTAEG + E  + LQRMR+L LQ+ANG N   +R AL  E      ++N
Sbjct: 65  MRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQDELN 124

Query: 124 ALLQNSEFNGVNLFSNTTQGTAARDYNADGDLLDYNGYGYYRDELMHSAGSTVINVQA-- 181
            + + + F G  L  N + G A+    +        G    R +     G + I  Q   
Sbjct: 125 RIAETTSFGGRKLL-NGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFIAEQPKT 183

Query: 182 ---GANAT-----------DNVAITLPTLRSNSDDFTLLGTDLAVNG------------- 214
              G   T           D  A+ L  +  + DD   L T   +NG             
Sbjct: 184 KEWGVPPTARDLKFEFTKKDGEAVVLDIIAKDGDDIEELAT--YINGQTDLFKASVDQEG 241

Query: 215 -TMRFVGISNIDLTLDYDVGVAAVHRTNDLGSTGWMDPEGYVAFTDSDYKSYAQIGVTAQ 273
               FV   NI+   +   G+A      +LG  G   P       D D  S       +Q
Sbjct: 242 KLQIFVAEPNIEGNFNISGGLA-----TELGLNG--GPGVKTTVQDIDITSVG----GSQ 290

Query: 274 QGLAVIDAALAQISTARVNLGAAQSRLESISSQLDTNIVNLTDARSRIEDADFSTESTTL 333
             + +IDAAL  + + R +LGA Q+RL    S L     N+  ++SRI+D DF+ E+T L
Sbjct: 291 NAVGIIDAALKYVDSQRADLGAKQNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQL 350

Query: 334 AKSQILSQAATAMLAQANARQQDVLKLLE 362
            KSQIL QA T++LAQA       + LL+
Sbjct: 351 TKSQILQQAGTSILAQAKQLPNSAISLLQ 379