Pairwise Alignments

Query, 916 a.a., Ribosome-associated ATPase RbbA from Sphingobium sp. HT1-2

Subject, 308 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  190 bits (483), Expect = 1e-52
 Identities = 95/231 (41%), Positives = 145/231 (62%), Gaps = 1/231 (0%)

Query: 277 DIAIEAQGLTMRFGDFTAVDHVSFRIRRGEIFGFLGSNGCGKSTTMKMLTGLLPATEGKA 336
           D AI A+ +  +FG FTA+++++ ++ RG I+GFLG NGCGKSTT+++LTGLL  T G+ 
Sbjct: 3   DYAIHAENVVKQFGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQI 62

Query: 337 WLFGNAVDPDDMSTRKRVGYMSQAFSLYTELTVRQNLEFHAHLFHVPREDIPARVAEMAD 396
            + G ++       R ++GYM+Q FSLY +LTV++NL+F   +F + R  +  R      
Sbjct: 63  KVLGLSIPKQSELLRLKIGYMTQKFSLYDDLTVQENLQFIGQIFGMNRSTLQQRTQAQLK 122

Query: 397 RFDLGPVMEELPDSLPLGIRQRLSLAVAMVHKPELLILDEPTSGVDPVARDGFWRLLAEL 456
            + L    ++    +  G +QRL+LA A +H PELL LDE TS VDP  R  FW  L +L
Sbjct: 123 TYGLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQLFDL 182

Query: 457 SRRDKVTIFISTHFMNEAMRCDRMSMMHAGHVLDSDAPARLIEKRGAPDLE 507
           S +   TI ++TH+M+EA RC R+++M AG +   D P +L+++ G   +E
Sbjct: 183 SAQG-TTILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKLMQQMGVNVVE 232



 Score =  132 bits (332), Expect = 3e-35
 Identities = 78/236 (33%), Positives = 128/236 (54%), Gaps = 6/236 (2%)

Query: 13  DPVVRLSGVRLHYGKTQALRGIDLDIPGGRMIGLIGPDGVGKSSLLSLVAGAHVIQDGDV 72
           D  +    V   +G   A+  I+L +  G + G +GP+G GKS+ + ++ G      G +
Sbjct: 3   DYAIHAENVVKQFGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQI 62

Query: 73  YVLGGDMRDKRHRSDVCPRIAYMPQGLGKNLYPTLSVEENLQFFGRLFGHDGAERRRRID 132
            VLG  +  +     +  +I YM Q    +LY  L+V+ENLQF G++FG + +  ++R  
Sbjct: 63  KVLGLSIPKQSELLRL--KIGYMTQKF--SLYDDLTVQENLQFIGQIFGMNRSTLQQRTQ 118

Query: 133 ALTRATGLDPFLARPAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLARAQFWDL 192
           A  +  GLD    +    +SGG KQ+L L  A +H+P+LL LDE T+ VDP  R +FW+ 
Sbjct: 119 AQLKTYGLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQ 178

Query: 193 INDIRQTQAQMSVIVATAYMDEAQRFDWLVAMDDGQILDTGTPAEIFARTGTSSLE 248
           + D+  +    +++V T YMDEA+R   L  M+ G+I     P ++  + G + +E
Sbjct: 179 LFDL--SAQGTTILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKLMQQMGVNVVE 232