Pairwise Alignments

Query, 916 a.a., Ribosome-associated ATPase RbbA from Sphingobium sp. HT1-2

Subject, 322 a.a., daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

 Score =  150 bits (380), Expect = 9e-41
 Identities = 77/212 (36%), Positives = 127/212 (59%), Gaps = 1/212 (0%)

Query: 279 AIEAQGLTMRFGDFTAVDHVSFRIRRGEIFGFLGSNGCGKSTTMKMLTGLLPATEGKAWL 338
           AIE + L  +F    AV++VSF + +GEIF FLG NG GKSTT+ +LT LL AT G A +
Sbjct: 3   AIEVKNLVKKFDTNVAVNNVSFSVNKGEIFAFLGPNGAGKSTTINILTTLLKATSGSAVI 62

Query: 339 FGNAVDPDDMSTRKRVGYMSQAFSLYTELTVRQNLEFHAHLFHVPREDIPARVAEMADRF 398
            G     D    RK +G + Q  +L  +LT  +NL  H  ++    E +  R+ E+ D  
Sbjct: 63  SGFDASKDPKKVRKTIGIVFQDSTLDNQLTAYENLYIHGKIYGYKGEILKNRIDELLDFV 122

Query: 399 DLGPVMEELPDSLPLGIRQRLSLAVAMVHKPELLILDEPTSGVDPVARDGFWRLLAELSR 458
           +L    +++  +   G+ +RL +A +++H+PE+L LDEPT G+DP  R   W  + ++  
Sbjct: 123 ELLEFKDKIVRNFSGGMVRRLEIARSLIHEPEILFLDEPTIGLDPQTRSHIWEYIKKMQA 182

Query: 459 RDKVTIFISTHFMNEA-MRCDRMSMMHAGHVL 489
           ++ +TIF++TH+M EA +  D+++++  G ++
Sbjct: 183 KNNMTIFLTTHYMEEAELLADKVAIIDNGKII 214



 Score =  105 bits (261), Expect = 6e-27
 Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 6/223 (2%)

Query: 30  ALRGIDLDIPGGRMIGLIGPDGVGKSSLLSLVAGAHVIQDGDVYVLGGDMRDKRHRSDVC 89
           A+  +   +  G +   +GP+G GKS+ ++++        G   + G D      +    
Sbjct: 18  AVNNVSFSVNKGEIFAFLGPNGAGKSTTINILTTLLKATSGSAVISGFDASKDPKKVRKT 77

Query: 90  PRIAYMPQGLGKNLYPTLSVEENLQFFGRLFGHDGAERRRRIDALTRATGLDPFLARPAG 149
             I +    L   L    +  ENL   G+++G+ G   + RID L     L  F  +   
Sbjct: 78  IGIVFQDSTLDNQL----TAYENLYIHGKIYGYKGEILKNRIDELLDFVELLEFKDKIVR 133

Query: 150 KLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLARAQFWDLINDIRQTQAQMSVIVAT 209
             SGGM ++L +  +LIH+P++L LDEPT G+DP  R+  W+ I  + Q +  M++ + T
Sbjct: 134 NFSGGMVRRLEIARSLIHEPEILFLDEPTIGLDPQTRSHIWEYIKKM-QAKNNMTIFLTT 192

Query: 210 AYMDEAQRF-DWLVAMDDGQILDTGTPAEIFARTGTSSLEEAF 251
            YM+EA+   D +  +D+G+I+  GT  E+    G   +   F
Sbjct: 193 HYMEEAELLADKVAIIDNGKIIAEGTVNELKKIVGNDCISVKF 235