Pairwise Alignments

Query, 375 a.a., Inner membrane transport permease YhhJ from Sphingobium sp. HT1-2

Subject, 371 a.a., ABC-2 transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  114 bits (284), Expect = 6e-30
 Identities = 86/361 (23%), Positives = 172/361 (47%), Gaps = 8/361 (2%)

Query: 13  VKELWSLWRDPIMLVLILFVFTVSIYTSANSKPETLHNAAIAIVDEDESPLSQRIVAAFY 72
           VKE  ++ RDP   ++++    + ++  + +    + NA I +++ D       +V    
Sbjct: 12  VKEFLAILRDPKGRMILIVPPLLQLFVFSYATTLEVKNADIILLNRDSGGWGWELVQRLD 71

Query: 73  PPQFTLPRMIA---PAQIDPGMDAGDFTFVLHIPHGFQRDVLAGRTAEIQLNTDATRMSQ 129
               T+ R++    PAQ+   +D       + I   F RD+ AGR A +Q+  D  R + 
Sbjct: 72  GTP-TIGRILITGDPAQVRAAIDGQRVLAAVEIGPAFSRDIEAGRPATVQILLDGRRSNA 130

Query: 130 AFSGSSYVQQIATAEVNEFVNRYRANSVPKVDLAVRARFNPTLNHTWFGALAQIINQIAM 189
           A   + Y+ QI  A++     R R        +  R+ FNP L   W   +  ++  IA+
Sbjct: 131 AQIVAGYLNQIV-ADLAAETPRGRRTEAKAPTVIARSWFNPNLLSQW-AMVPGLVAIIAL 188

Query: 190 LS-IILTGAALIREREHGTIEHLLVMPVTPFEIMLSKVWSMGLVVLLASSLSINLVVQGL 248
           L+ +++T  ++ RERE GT + L+V P+   EI+  K+    +++ LA   +  +V   +
Sbjct: 189 LTGLVVTALSIAREREFGTFDQLMVSPLRTHEILAGKMIPP-ILIGLAHITAFLVVSIFV 247

Query: 249 MHVPVAGSLALFFAGAALVLFSTTSMGIFLATLARNMPQFGMLMILVLLPLQMLSGGTTP 308
             +P  GSL + +  + + L +   +G+F++ L+    Q  +   ++++P+ +LSG  +P
Sbjct: 248 FEIPFRGSLFVLYGSSVVYLAAVVGLGLFISALSMTQQQAILGAFMLMVPMVLLSGFASP 307

Query: 309 RESMPKLVQDVMLFAPTTHFVELGQAILFRGAGIGVVWPQFAATAAIGIAFFLIALTRFR 368
            ++MP+ +Q +    P  +++ + + +  +   +  V       AAI +     A   FR
Sbjct: 308 IDNMPEWLQPLTRLDPLRYYLVIVKGLFLKDLALTEVIANVVPLAAIAVVTLGAAAWLFR 367

Query: 369 R 369
           R
Sbjct: 368 R 368