Pairwise Alignments

Query, 749 a.a., Two-component system sensor histidine kinase from Sphingobium sp. HT1-2

Subject, 565 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  284 bits (727), Expect = 8e-81
 Identities = 180/435 (41%), Positives = 241/435 (55%), Gaps = 29/435 (6%)

Query: 322 DGGQVFGFT-DVTDMLRAQASLQETAETLERRVSERTGELVDLNRKLEGEVAERRAIEAA 380
           + G V GF  DVT+   AQ  L +  E LE+RV+ERT E                     
Sbjct: 143 EDGLVEGFVADVTERKLAQLRLLQLNEELEQRVAERTCE--------------------- 181

Query: 381 LIDAKIVAEKANLSKTRFLAAASHDLLQPLNAARLFVAALGDRRLALPTRALVNQTSTAL 440
           L +A+  AE ANLSK ++LAAASHDLLQPLNAARL ++ L +R+L      LV +   AL
Sbjct: 182 LREARDAAEAANLSKDKYLAAASHDLLQPLNAARLLISTLRERQLPQSELHLVERAHLAL 241

Query: 441 DSVEDLLEALLEISRLDAGAIQPEIGPFRIDRLLQTLNVEFAPMARSAGLAFRIEAQPLW 500
           +  EDLL  LL+IS+LD  AI+P+I  + +D +L  L  EF P+A + GL          
Sbjct: 242 EGAEDLLTDLLDISKLDQAAIKPDIDAYSLDDILLPLISEFQPVAAAKGLQLSHYLPRCA 301

Query: 501 VETDLRLLRRILQNFISNAIRYTPRGTVSVACIQHDDRVEISVTDSGPGIAPEQQALIFE 560
           +  D RLL RIL+N +SNA RYT  G V +   +  D + I V D+G GI  E    IF 
Sbjct: 302 ISCDFRLLTRILRNLLSNACRYTDAGGVLLGARKRGDMLRIEVWDTGRGIPEEDLHSIFL 361

Query: 561 EFRRLD----TRSQGKGLGLAIVKRASDMLGHPISLRSQPGQGATFAIALPIGQ--PQRE 614
           EF +L         G GLGLAIV R ++ML + + +RS+PG+G+ F+I +P+    P R 
Sbjct: 362 EFNQLGVSRAAERSGVGLGLAIVDRIANMLDYRVLVRSRPGRGSVFSIDVPMAATVPPRS 421

Query: 615 EDGDTGQPTRDRSMRDLSVLVVDNEKQIQSGMRTLLTGWGCSVVTADGYDQAAALFADGR 674
                  P     +    +LV+DNE  I   M  LL  WGC+VVTA   +Q A     G 
Sbjct: 422 AVTPVIAPQLGDPLPGRRLLVIDNETSILHSMAALLEQWGCTVVTATD-EQTAIAALGGV 480

Query: 675 RPDIILVDYHLKDGETGDTVITRLHDHFGVRIPAVMISADRGEPLKTQLAAANIPLLNKP 734
            PD IL DYHL  G TG  V+  L   F  R+P VMI+ADR +  + QL    +P+LNKP
Sbjct: 481 APDAILADYHLDHGSTGWDVVLALRARFSTRLPVVMITADRSDQCRRQLQGVGVPVLNKP 540

Query: 735 VKPAQLRALLRTMLA 749
           VKP ++R++L  +L+
Sbjct: 541 VKPGKMRSVLSHLLS 555