Pairwise Alignments

Query, 749 a.a., Two-component system sensor histidine kinase from Sphingobium sp. HT1-2

Subject, 977 a.a., periplasmic sensor hybrid histidine kinase from Synechococcus elongatus PCC 7942

 Score =  146 bits (369), Expect = 4e-39
 Identities = 131/431 (30%), Positives = 201/431 (46%), Gaps = 44/431 (10%)

Query: 337 RAQASLQETAETLERRVSERTGELVDLNRKLEGEVAERRAIEAALIDAKIVAEKANLSKT 396
           R   +L+E   +LE RV ERT  L + N +LE               A+  AE AN +K+
Sbjct: 434 RMAVTLRELLVSLEHRVQERTAALRETNDRLE--------------QAREQAEAANQAKS 479

Query: 397 RFLAAASHDLLQPLNAARLFVAALGDR-------RLALPTRALVNQTSTALDSVEDLLEA 449
            FLA  SH+L  PLNA   +   + +           LP    +N     L    +L+ +
Sbjct: 480 AFLANMSHELRTPLNAIIGYSEMMMEEAEDGIEVEELLPDFRKINNAGKHL---LELINS 536

Query: 450 LLEISRLDAGAIQPEIGPFRIDRLLQTLNVEFAPMARSAGLAFRIE--AQPLWVETDLRL 507
           +L++S+++AG ++  +  F +  L+  +     P+         ++  A    +  D+  
Sbjct: 537 ILDLSKIEAGRMELYLESFSLPELINGVKSIIKPLIEKNQNQLLVDCPADIGLMTADVTK 596

Query: 508 LRRILQNFISNAIRYTPRGTVSVACIQHDDRVEISVTDSGPGIAPEQQALIFEEFRRLDT 567
           LR+ L N +SNA ++T +GT+ +      D+V   V DSG G++PEQ   IFE F + D 
Sbjct: 597 LRQTLLNLLSNASKFTHQGTIQLQVAAQGDQVVFKVVDSGIGMSPEQIDRIFEAFAQADD 656

Query: 568 RSQ----GKGLGLAIVKRASDMLGHPISLRSQPGQGATFAIALP--IGQPQR-------E 614
            +     G GLGL+I +   +M+G  I++ S  G+G+TF I LP  +  PQ         
Sbjct: 657 STTRKFGGTGLGLSISRHFIEMMGGKITVESVLGEGSTFTITLPRQVQPPQSIPAVDPVL 716

Query: 615 EDGDTGQPTRDRSMRDLSVLVVDNEKQIQSGMRTLLTGWGCSVVTADGYDQAAALFADGR 674
            D      T         VLVVD+E   +  +R +L   G  VVTA G  +     A   
Sbjct: 717 TDEAIATATEQEDQNQPVVLVVDDEPSARELLRRMLEKEGYRVVTAAGGAEGLQR-AQEL 775

Query: 675 RPDIILVDYHLKDGETGDTVITRLH-DHFGVRIPAVMISADRGEPLKTQLAAANIPLLNK 733
           RP +I +D  +   + G +V+T L  D     IP VM+S   G  L   L AA+   L+K
Sbjct: 776 RPALITLDLMMPQVD-GWSVLTALKADPMLAEIPVVMVSMVEGRSLSYALGAAD--YLHK 832

Query: 734 PVKPAQLRALL 744
           P+   QLR +L
Sbjct: 833 PIDRDQLRRIL 843



 Score = 26.6 bits (57), Expect = 0.007
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 45  AFSMFETAISLEAKVRDRTLQLEDALGRLAKANADLAEAHADADAA 90
           A ++ E  +SLE +V++RT  L +   RL +A  + AEA   A +A
Sbjct: 436 AVTLRELLVSLEHRVQERTAALRETNDRLEQAR-EQAEAANQAKSA 480