Pairwise Alignments

Query, 298 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 288 a.a., shikimate 5-dehydrogenase from Synechococcus elongatus PCC 7942

 Score =  115 bits (289), Expect = 9e-31
 Identities = 88/263 (33%), Positives = 122/263 (46%), Gaps = 9/263 (3%)

Query: 17  LCGLIGQGIAGSRSPHMHETEAKALGLTLVYRILDADRMGYRADDLPRLLPMLGAMGFDG 76
           L G+IG  I  S SP +       LGL   Y          +  DL   L  L A+G  G
Sbjct: 10  LLGIIGDPIEHSLSPLIQNAAIAELGLDYCYVPFPV-----KGADLATALAGLAAIGVQG 64

Query: 77  INVTHPFKQAVIPLLDSLSDAARALGAVNTILFRNGQAHGDNTDWSGYRAHFLAGLADRP 136
            NVT P KQAV+PLL  +S+ A+++G+VNT+        G NTD  G+ A      +D  
Sbjct: 65  FNVTIPHKQAVMPLLSQVSELAQSVGSVNTVWQTEQGWVGTNTDVLGFLAPLQTLRSDWS 124

Query: 137 RGRIAMIGAGGAAAAVGYAHLDLGATHLAIVDPAQERAAALADRLGALFPAARVQAMAHA 196
             R+ ++G GGAA AV    L LG + +A V    ++  A     G    +  +   +  
Sbjct: 125 GCRVVLLGCGGAARAVVAGCLQLGCSAIATVVRDAQKGDAFQQSWGDRADSLTIHDWSDI 184

Query: 197 ADAIADADGVVQTSPIGMLSH-PGLPFD---PDLLTPDQWVSDIIYFPLHTPLLVAAQAK 252
            D ++ AD VV T+P+GM  H    P D      L P+    D+IY P  T  L  A A+
Sbjct: 185 PDVLSTADLVVNTTPLGMDPHIERSPLDNSAAQQLRPETIAYDLIYTPSPTRFLQQAIAQ 244

Query: 253 GCAILTGGGMAVMQAAHAFALFT 275
           GC  + G  M V Q A    ++T
Sbjct: 245 GCHAIDGLEMLVQQGAAGLKIWT 267