Pairwise Alignments

Query, 947 a.a., Hybrid sensory histidine kinase from Sphingobium sp. HT1-2

Subject, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

 Score =  296 bits (758), Expect = 4e-84
 Identities = 217/692 (31%), Positives = 346/692 (50%), Gaps = 58/692 (8%)

Query: 178 EEILAKNQALEARTREAEEANRAKSLFLANMSHEIRTPMNAILGFCHLVARTDLDPKQQD 237
           E++  +N  L+   + A+EA R KS FLANMSHE+RTP+N ++GF   + +T L   Q D
Sbjct: 268 EQLEIQNVELDIAKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQAD 327

Query: 238 YIGKINQAGVSLLRLINDILDFSKNEAGKLTLEAHPFTLRSAIENQIQLVAANAEAKQVR 297
           Y+  I ++  +LL +INDILDFSK EAGKL LE  PF  +  +E  + L A +A  K + 
Sbjct: 328 YLQTIEKSANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLE 387

Query: 298 VVSRVDADVPERLIGDEMRFCQVVLNLMSNAVKFSEEGTVTIGLS-ASEQNGRVRLKLTV 356
           +  ++D  +P  ++GD +R  QV+ NL+ N++KF+E G + + +   + ++  + L+  V
Sbjct: 388 ITLKIDPKIPRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMV 447

Query: 357 RDTGIGMTPEQQKSLFHSFTQADSSTTRRFGGTGLGLAICRQIVEQMGGDIAVESAPGQG 416
           RDTGIG++  QQ  LF +F+QAD+S +RR+GGTGLGL I +++V  MGG+I++ S   QG
Sbjct: 448 RDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQG 507

Query: 417 SSFICHMLMDADDRAMGLEMPM-----SAHVRRLRVLAADDNPASRQIIHDVFAGWGMAV 471
           S+F   +      R    E+P+     +  +    +L  + N  +  I+       G+ V
Sbjct: 508 STFWFTL------RLHTTELPLNDGYNADSLNHRHLLLIEPNMQAAAIVQQTLVQSGLEV 561

Query: 472 DLVASGGEAIAAIEHADERGEPYDLALLDWKMPGLDGMETVDAL---RATALRHPQPKAL 528
               +   AI   +H       YD  LL+   P  +   T+  L   RA A+ H     +
Sbjct: 562 ----TYRSAIPEEQHV------YDYVLLN-LAPSKETNPTLVELWVQRALAMTHNVIVGV 610

Query: 529 IITAYG-ADDLLQGVDTDKVAAFLTKPVVPKILLDTITEIFAEEHAPVVHVAASATPALP 587
             T    AD L+Q          ++KP+  K LL T+                 A  +LP
Sbjct: 611 PSTELALADQLMQRYP----VKCISKPLSRKKLLQTL----------AAQQPQLANTSLP 656

Query: 588 MVAEALRGLRVLLVEDNEINREIAAELLDDAGLKVDFAENGRIACDMVREKGAGYAAVLM 647
                   L V+ V+DN  N ++   LL +    V    +G+ A +  + +   +  +LM
Sbjct: 657 KPQADKLPLCVMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQAQSR--QFDIILM 714

Query: 648 DVQMPEMDGISATRIIREQWNAEDLPIIAMTAHAYEEEKQRCKAAGMNDHIAKPVEPPVL 707
           D+QMP MDG++A + I++     D P+IA+TAHA   E+ R   AGM+D++ KP+E  +L
Sbjct: 715 DIQMPHMDGVTACKAIKQLKGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHIL 774

Query: 708 VRVLDRW------LKAGRVTTPLPSPVVPTVASSSLPDRLPPFDLPAALARVNGKTGLLR 761
            +VL  W       +  +VT P  + V+     SS P      D P AL +   K  L +
Sbjct: 775 QQVLVHWSPHTRSKQVAKVTPPDGAAVISNALPSSPPAEEAIIDWPVALRQSANKEDLAK 834

Query: 762 KLIVTFGDSYDHVGRDLRAHLAAGLLP--DARRLAHSLKGVAGSLELPGVQQIASDIERM 819
           +++    D    V   +   L     P  D     H L G      +P +++I + +E+ 
Sbjct: 835 EMLGMLVDYLREVETVVNTALEDEEYPASDLLHHIHKLHGSCSYSGVPRLRKICASLEQA 894

Query: 820 L----AADETGPALAAIVDLEVAIAPAIAAAR 847
           L    + DE  P L    +L+  +A  + A+R
Sbjct: 895 LRNGASIDELEPEL---FELQDEMAKVLEASR 923