Pairwise Alignments

Query, 894 a.a., TonB-dependent receptor from Sphingobium sp. HT1-2

Subject, 967 a.a., TonB-dependent receptor (RefSeq) from Shewanella amazonensis SB2B

 Score =  204 bits (520), Expect = 2e-56
 Identities = 248/987 (25%), Positives = 407/987 (41%), Gaps = 184/987 (18%)

Query: 2   KGAMKLSISLV-ALLAAQEAVAQGDAEASGTGVSDVDII-VTGMRASLSSAQNIKRNAQQ 59
           K  +   +SL+  LL A   +A+    A G    D+++I V G+R S + +  +KR +  
Sbjct: 8   KSMLATQVSLMMGLLTAMPVMAEEAPIAEG----DIEVIQVKGIRGSQAKSMELKRQSAG 63

Query: 60  LVDSVVAEDIGKLPDNNVVEALQRVPGIQVSPRARGESATVLIRGL-PDV-VTLVNGR-- 115
           +VD++ AEDIGK PD N+ E+LQR+ G+ +  R  GE + V +RG  PD  + L+N R  
Sbjct: 64  VVDAISAEDIGKFPDTNLAESLQRITGVSID-RVNGEGSKVTVRGFGPDFNLVLLNNRTM 122

Query: 116 ---NIFSTTGRSLSLADVPADLVAGVDVYKSRSADQLEGGIAGLINVRTRRPFDFKGLEV 172
               +   + RS   A++ +D V+GV++YK+  AD   GGI   IN+RT RPFD +GL V
Sbjct: 123 PTAQVAGESTRSFEFANLASDAVSGVEIYKTGKADISSGGIGSTINIRTARPFDTRGL-V 181

Query: 173 ALAG----REVYSEQPDTIDPYASALISNRWSTGIGEIGALVSVSYHKTRYRDFTVYSGG 228
           A  G     +   E   +I P  S + SN +      +G  ++ SY +   RD  +    
Sbjct: 182 ATVGVKGHHDTNVEDGSSITPEISGIFSNTFLD--DTLGFGLNASYQE---RDSNIKKAT 236

Query: 229 YFGY--NLDNSRAPYTPGV--PLDPRGNGANDPAVFRTDVIGAFDRIGTRTRPAVNATLQ 284
             G+  N+D    P    V    +P GN       F    IG   +   R R       Q
Sbjct: 237 IDGWRQNIDGELNPNAVVVNENKNPYGN------TFYARNIGFASQDTERERTNAQLVFQ 290

Query: 285 WAPDDRLTIHADGLFYGYRERGNGNQNFTSMNGTLRSPLAFVGDTKLVESLSISGGRVAN 344
           +AP D + +  D  +    +  N +      +G   +  A + +    + ++  GG  + 
Sbjct: 291 YAPSDTIEMTLDYTYSKLSDVSNADTWGLWFSGPGNATYAHINENGTFDYVTEVGGDYS- 349

Query: 345 FGTAYRNKADRWQGAIG--ADWEAND-----WKAATELSYTRSKATDVGNNLDVDFIASR 397
            GT  +N +D    ++G   +W+A D     + A    +    K  +  +N+     A  
Sbjct: 350 -GTMQQNASDNINKSLGFNIEWQATDNLLLSFDAHDSNANAEGKLGNYADNIFFILGALN 408

Query: 398 TDAVFNDGSGTP-------YFSL-PNDDIADPDRYYLSRLSTTRTIGDGREWAWRGDLSY 449
                 D +GT        Y +L PN +      +Y S  +  R    GR         +
Sbjct: 409 VADKTYDATGTEIPLLGANYGTLNPNGEPHLLPEHYASLFAGVRA---GRNETDVNQYQF 465

Query: 450 RAPFL-----IFSGLDTGLRISQRDAQSD-SFTQTVNCGPAVSVKCYAVKAASLPGLMTV 503
              +L       S +D G+  +  +  +  S+T  ++ G   ++  +     S  GL   
Sbjct: 466 DGRWLNENSDALSSIDFGVSFTSMETHAQGSYTGPISAGWYGNMGLWK-DDVSYVGL--- 521

Query: 504 TPGGFDTGTGKFVEQWATPGTDYLLNNIGSLRQ---------LFGLAPGDPAFQDTQHFD 554
              G D     F+  ++  G D L+    S  Q         L+ +      +QD     
Sbjct: 522 ---GSD-----FLSDFSGGGNDMLIPYYYSYDQQAAMDKAQALYDVEYVSAPWQDDHR-- 571

Query: 555 IKEKNQAGYGQANIEVG----QLDGQVGVRVIRTDITSNAF------LVLRGATSPVTI- 603
           IKE   A Y Q NI+       L+   G+R  +TD+T+++       LV    T   T+ 
Sbjct: 572 IKEDTTAAYVQVNIDSEFNNMPLNIVAGLRYEQTDVTASSMQKEAQQLVWLNPTEWQTVY 631

Query: 604 ---------RNKSTDVLPSLALRYKLKDNLFLRFAASKTITRPSFAQLNPALTLTP-PVP 653
                     +   + LP+L +  ++ +N+  RF+ S+TITRP+   +     LTP P  
Sbjct: 632 ADDFSYSHETHDYKEFLPNLDINLEVMENVMARFSYSRTITRPTLGSMRATTALTPIPKV 691

Query: 654 GQQPFGRGTSGNADLKPIRSDNYDLSLEWYIDRSSSITATIFRRDVKGFIQSVTSNFDID 713
           G +    G +GN  LKP  S+N DLSLE+Y D +S ++   F ++V+ F+ +       D
Sbjct: 692 GSR---TGFAGNPALKPFSSNNIDLSLEYYYDDASYVSVGYFNKEVENFLMNTIETVKYD 748

Query: 714 YL----------------------GADNGVYQ--------------------------IT 725
           +L                       +D  V+Q                          I+
Sbjct: 749 HLLDPYVGPAAEQARAELIANNETPSDEAVFQWLIDNGYGNADGRVPQSGADPVADWNIS 808

Query: 726 RLENSGSGRLQGIEGGFTFFPKGLPQWLDGIGISANGTYIDGNNK-------ALSPLPGV 778
           +  N     + G+E  +  +      W  G G +AN T +DG+ +           LPG+
Sbjct: 809 KPNNVEDLNINGVELAWQHW-----FWDTGFGFAANYTLVDGDTEYDVERVDEQFALPGM 863

Query: 779 TGYMDIPFQNVSKYSGTATFIYEKGGFSGRASYVWRDKYNVGL---HFTGVNPSFITNGA 835
           +             S   +  YEK G  GR +Y WRD +  G+      G  P F    A
Sbjct: 864 SD------------SANFSVFYEKDGLQGRLAYNWRDTFLSGMGQAEAGGPAPQF--TEA 909

Query: 836 ISNLDLSLSYEINPQFTVVFDATNILK 862
              LD+S+SY++    ++  +  NIL+
Sbjct: 910 FGQLDISVSYQLTDNLSIFAEGINILE 936