Pairwise Alignments

Query, 258 a.a., Exodeoxyribonuclease III (EC 3.1.11.2) from Sphingobium sp. HT1-2

Subject, 268 a.a., exodeoxyribonuclease III from Phaeobacter inhibens DSM 17395

 Score =  296 bits (759), Expect = 2e-85
 Identities = 151/268 (56%), Positives = 194/268 (72%), Gaps = 15/268 (5%)

Query: 1   MRIATFNINGIKARLPRLLEWLDETRPDIACLQEIKTSDETFPVKDIEDAGYGVIWHGQK 60
           M+IATFNINGIKAR+  L EWLDE +PD+  LQEIK+ DE FP +  ED GY V  HGQK
Sbjct: 1   MKIATFNINGIKARINALPEWLDEAQPDVVVLQEIKSVDEAFPRELFEDRGYNVETHGQK 60

Query: 61  GFNGVAILARGDQPVE-VRRGLEGEPEDEQSRYLEADVKG---VRVASIYLPNGNP---- 112
            FNGVAIL++   P+E VRRGL G+  DEQ+R++EA V G   +R+  +YLPNGNP    
Sbjct: 61  SFNGVAILSK--LPLEDVRRGLPGDDSDEQARWIEATVVGKQAIRICGLYLPNGNPVELD 118

Query: 113 ---QP--GPKFDYKLRWMKRLRERAAEIWAEEVPAILAGDYNVIPRDVDIYSPKAMADDA 167
              QP  G K+ YKL WM+RLR+RA ++ AEE+PA++AGDYN+IP+  D  +P+A  DDA
Sbjct: 119 AEGQPVEGGKYAYKLAWMERLRQRAKDLLAEEMPALMAGDYNIIPQAEDAKTPEAWKDDA 178

Query: 168 LMQPESREAYRRLLGDGWTDSILTRHPAGGVWTYWDYQAGAWPRDAGFRIDHLLLSPAAA 227
           L +PESR A++R++  G+T++   RH   G +++WDYQAGAW R+ G RIDH LLSP AA
Sbjct: 179 LHRPESRAAFQRIMALGFTEAFRARHQGPGHYSFWDYQAGAWNRNNGIRIDHFLLSPQAA 238

Query: 228 DRLVDAQVDKAFRGREKASDHAPTWVEL 255
           D L D Q+DK  RGR+K SDH P WV+L
Sbjct: 239 DLLRDCQIDKDVRGRDKPSDHVPVWVDL 266