Pairwise Alignments

Query, 366 a.a., Lipopolysaccharide export system permease protein LptG from Sphingobium sp. HT1-2

Subject, 356 a.a., LPS export ABC transporter permease LptG from Vibrio cholerae E7946 ATCC 55056

 Score =  107 bits (267), Expect = 5e-28
 Identities = 89/360 (24%), Positives = 166/360 (46%), Gaps = 17/360 (4%)

Query: 11  VSWYMVRLFLTRTLAVLAMLVVVLQMLDLLGNSGDILAYPGNGDAQLWH---YVGLRAPQ 67
           + WY+ R  +  T  VL   V +  ++  +    + L   G G   L     +V L  P+
Sbjct: 5   LDWYIGRTIVATTALVLVTFVGLSGIIKYV----EQLRKVGEGSYDLLQALLFVVLSIPR 60

Query: 68  IVARFLPFSVLLGTLIMLATLNQNSEIIAMKAAGLSAQQILAPLIAAALGVSALSYAFNE 127
            V  F P + LLG LI L  L  +SE++ M+AAG S   I   ++  A+ +  +     E
Sbjct: 61  DVEMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGE 120

Query: 128 RIVARSTAMLSAWQAVDFGPVPADSGIKTNPWVRDGNNLVTAAIVAG-HGQDVQLRKVEI 186
               ++  M    +A       A   ++T  W RD N+ +  A V   H   + L + + 
Sbjct: 121 WGAPQAQKMARDMRAFATSG-GAIMSVRTGVWARDANDFIFIAKVENEHLYGLNLWRFDE 179

Query: 187 FNRINNSLTTIITAPKGHYDAASKSWVLEGA---RQFDVARGTLQNVGTVRFGSDIRPDQ 243
               N  L+T+I + +  Y  A+  W+++ A   R  +    + +++   R+ + + PD+
Sbjct: 180 ----NKKLSTVIFSEQVDY-VANNEWLMKDAVLTRLVNDIEISKESLPEYRWRTSLAPDK 234

Query: 244 FTLAKVDPDALTFSELQAAIGDLHDAGRPTAELEGSLWHKLSGPLSAVLMPILGSVAAFG 303
             +  V P+ L+ + L   +  L  + + ++  E +LW K++ P+S  +M ++     FG
Sbjct: 235 LAVVTVKPEELSLTGLSDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFG 294

Query: 304 LARSGQLFLRAVMGMALGFAYFVADNFSLAMGNLGAYPPILAAWAPFLLFLLLGETVLFR 363
             RS  +  R + G+  GF+++++  F   +  +   PP+  A AP L+FL +   +L R
Sbjct: 295 PLRSVTMGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGR 354