Pairwise Alignments

Query, 426 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 413 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

 Score = 50.8 bits (120), Expect = 7e-11
 Identities = 82/411 (19%), Positives = 152/411 (36%), Gaps = 44/411 (10%)

Query: 14  KQENARYLDPKGNRLAL-VVTKFSKTWT--WQARVNGVPRTLTLGKFPAVGLADARAKAG 70
           K+ +  Y    G+ L L V T  +K W   +   +      ++ G FP V LA+AR +  
Sbjct: 17  KESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGCFPDVSLAEARKRRS 76

Query: 71  QIQADHDAGIDVHVKYGAGLAAPDAMPVAEAKRAGMTCQEAWDRYISGLKAGTNLHGKAR 130
           + +      ID            D   + E      T  +  DR+++  +          
Sbjct: 77  EAKTLLALNIDPKQH-------KDEQLLKERAELENTFGKYSDRWLTLKRESV------- 122

Query: 131 NKPRTIIEKEGMWTRLWAEEIGGTLMDEVTEEALYDVIQGLRDDGYMGAANSTTRYIKAF 190
            KP T  +      +    ++G   + ++    +  +++ ++  G +       R I   
Sbjct: 123 -KPETADKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEV 181

Query: 191 FRWGKLEKRATGLRTNPAEDLPVSQLQARDRYLTENEIRYLLTALQAEDQIWMDAYRLAL 250
            R   L   +  +  N   D+       + +++   E   L   +QA     +      L
Sbjct: 182 MR---LAVASGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIANANITLATRCL 238

Query: 251 MTGQ-----RKNEIFGALRSEVDIGARHITISADRMKHNRAHVVPLTQQAWEIVERRLKA 305
           +  Q     R  E   A   ++D   +   I A+RMK  R H +PLT+Q   ++E     
Sbjct: 239 LEWQLHTMTRPIESATARWQDIDFKNKVWVIPAERMKMKRPHTIPLTEQTLALLEIMKPI 298

Query: 306 TTSR-YLFAAGDGDNHLTGFSKRQAAIKAAVVKLAAADGIEVAHWSFHDLRRSVSTHMNG 364
           ++ R Y+F +               A+K    K              H LR   ST +N 
Sbjct: 299 SSHREYIFPSNKNPKSHVNSQSANMALKRMGYK---------GQLVSHGLRALASTTLN- 348

Query: 365 LRDEGGNRLIAKDHIERVLSHIIRG-VEGTYDRNDYYAEKRRALMLWANRL 414
             ++G N     D IE  L+H+ +  V   Y+R +Y  ++R+ +  W++ +
Sbjct: 349 --EQGFN----PDIIEAALAHVDKNEVRKAYNRAEYLEQRRKLMSWWSSHI 393