Pairwise Alignments

Query, 428 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 417 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  110 bits (276), Expect = 6e-29
 Identities = 94/380 (24%), Positives = 168/380 (44%), Gaps = 31/380 (8%)

Query: 4   KIRTQDVKLGMFLHKLDGSWFSHPFWKRKMLLDDPEQLADLHASKVEWVTIDVSRGADVA 63
           KI    ++ G+++ +L   W  HPF      +   EQ+  +    ++ V ++      ++
Sbjct: 5   KITVDRLQPGLYI-RLPVKWNEHPFLFNSFKIKSQEQIQLIKHLGIQHVFLNPG----LS 59

Query: 64  PAQPVPSRVVQMAEPRERVFGRAGPTIVRRAAPQPVDRPFDPLSKDKLP-------IRAE 116
            +QP+P  V + A P E              A  PVD   + L ++K          R  
Sbjct: 60  DSQPLPPSVEE-ATPEE--------------ALPPVDSEAEKLWQEKQTRIEKLNEYRRR 104

Query: 117 MVHAQRLARKSGRTMRKLYEDVRLGKAVKAAKLETMVDEISSSVQRNPHAFMAITRMKNS 176
           +   ++   +S   MR +   +R        +   +VD+I   +  + +  + +   K+ 
Sbjct: 105 VQTCEKEFERSLARMRAVVNKIRNRPLDAVGEAIILVDDIVDKLLSDDNVTLHLMNSKSE 164

Query: 177 GEYLYQHAL--SVCALMIGLAQQMHLSPEDIRKAGLAGLLMDMGMAHVPQEVWDKDAPLT 234
            E +Y H+L  SV A+MIG A+   L  E I++   A L  D+G   VP  +  K  PLT
Sbjct: 165 FEDIYFHSLNVSVIAMMIGKARG--LPAERIKELAFAALFHDIGKVRVPTAIVRKKTPLT 222

Query: 235 PEEWDVVKSHTTLAHEFLTLGGEMPAEVLDVCLNHHERLDGSGYPNGLAGEQIGMFARMA 294
             E + ++ HT    E        P     V   HHE  DGSGYP GL G+ I   A++ 
Sbjct: 223 EPEENYLRLHTKYGIELADNIETFPESAKRVIEQHHELRDGSGYPLGLKGDDIDELAQIV 282

Query: 295 AICDSYDAMTSNRLHRSGEDPSRALLKIDEDGGALFDAEIFQAFQRAVGIYPIGSLVRLR 354
           A+ +++D +    +    + P  AL  + ++   +++AE      + +G++P G++V+L 
Sbjct: 283 AVANAFDNLCHPNIPSEQKIPYVALSHLFKNCKHIYNAENLGILVKFMGVFPPGTVVQLS 342

Query: 355 SHRLAIVVEQNPDDLTLPKV 374
           +  + +V+  N   L  P V
Sbjct: 343 NDMVGLVISVNASSLLYPNV 362