Pairwise Alignments

Query, 300 a.a., Site-specific tyrosine recombinase XerC from Sphingobium sp. HT1-2

Subject, 299 a.a., tyrosine recombinase XerC from Pseudomonas stutzeri RCH2

 Score =  150 bits (379), Expect = 3e-41
 Identities = 106/291 (36%), Positives = 150/291 (51%), Gaps = 14/291 (4%)

Query: 15  QHLSLDRRRSAHTVRAYVATAERLVAFLAEHQGQAVTAASLARLEQADLRAYLASRRVDG 74
           +HL   R+ S H++  Y     +L+A     Q      A    L+   LR  +A     G
Sbjct: 10  EHLRSARQLSGHSLEGYRRDLNKLLAHCEREQ-----IADWRGLQGRHLRQLIAELHRQG 64

Query: 75  IGNISAARELSAVRGFLKFVG--GAEARVPQ--LKGPRVKRGLPRPISPDEALALAGDVA 130
             + S AR LS+VRG  +++   G     P   L  P+ +R LP+ +  D A+ L     
Sbjct: 65  QSSRSLARLLSSVRGLYRYLNQEGICQHDPAAGLSAPKGERRLPKLLDTDRAMQLLDG-- 122

Query: 131 EGAREDWIGARDWAVLLLLYGAGLRIGEAMGLMGDIMPL-GDTLRVTGKRGKTRLVPLLP 189
            G  +D+I  RD A+L L Y +GLR+ E +GL  D + L    +RV GK  K R +P+  
Sbjct: 123 -GVEDDFIALRDQAMLELFYSSGLRLSELVGLNLDQLDLPAGLVRVLGKGNKVRELPVGR 181

Query: 190 QVRSAIEAYADQCPWSPERDQPLFRGARGGPLSAALIRRSVQGARGRLGLSDRTTPHALR 249
           + R A++A+      +   D  +F G +G  L A  ++  V+ A G   L     PH LR
Sbjct: 182 KAREALQAWLPIRALANPADGAVFIGQQGRRLGARAVQMRVRQA-GVRELGQHLHPHMLR 240

Query: 250 HSFATHLLGRGADLRSLQELLGHASLTSTQVYTQVDAAHLLDVYRAAHPRA 300
           HSFA+HLL    DLRS+QELLGHA + +TQ+YT +D  HL  VY  AHPRA
Sbjct: 241 HSFASHLLESSQDLRSVQELLGHADIGTTQIYTHLDFQHLAKVYDQAHPRA 291