Pairwise Alignments

Query, 300 a.a., Site-specific tyrosine recombinase XerC from Sphingobium sp. HT1-2

Subject, 311 a.a., tyrosine recombinase XerC from Vibrio cholerae E7946 ATCC 55056

 Score =  127 bits (318), Expect = 4e-34
 Identities = 91/296 (30%), Positives = 149/296 (50%), Gaps = 15/296 (5%)

Query: 11  ERWRQHLSLDRRRSAHTVRAYVATAERLVAFLAEHQGQAVTAASLARLEQADLRAYLASR 70
           ER+  +L  ++  S +T R Y    E +  +L +     V      +L+ A +R  +   
Sbjct: 18  ERFYAYLHTEKGLSLYTQRNYKQQLETMTQYLVQ-----VGLTHWTQLDSAWVRQLVMQG 72

Query: 71  RVDGIGNISAARELSAVRGFLKFV---GGAEARVPQ-LKGPRVKRGLPRPISPDEALALA 126
           +  G+   S A  LS++R FL F+   G  +A   + +  PR +R LP+ +  DE   L 
Sbjct: 73  KRQGMKASSIATRLSSLRSFLDFLILRGELQANPAKGVSAPRKQRTLPKNLDVDEMAQLL 132

Query: 127 GDVAEGAREDWIGARDWAVLLLLYGAGLRIGEAMGL-MGDIMPLGDTLRVTGKRGKTRLV 185
               E   +D +  RD A++ L+YGAGLR+ E + + + D+      +RV GK  K R V
Sbjct: 133 ----EVTDDDPLSIRDRAIMELMYGAGLRLAELVSIDIKDVNLSEGEIRVIGKGNKERKV 188

Query: 186 PLLPQVRSAIEAYAD-QCPWSPERDQPLFRGARGGPLSAALIRRSVQGARGRLGLSDRTT 244
               Q +  +  +   +   +   +  LF    G  +S   +++ +     +  ++   +
Sbjct: 189 WFAGQAQEWVGKWLKLRSQLADSAETALFVSKLGTRISHRSVQKRMAEWGQKQAVASHIS 248

Query: 245 PHALRHSFATHLLGRGADLRSLQELLGHASLTSTQVYTQVDAAHLLDVYRAAHPRA 300
           PH LRHSFATH+L    +LR++QELLGH ++ +TQ+YT +D  HL  VY  AHPRA
Sbjct: 249 PHKLRHSFATHMLESSNNLRAVQELLGHENIATTQIYTHLDFQHLAQVYDQAHPRA 304