Pairwise Alignments

Query, 300 a.a., Site-specific tyrosine recombinase XerC from Sphingobium sp. HT1-2

Subject, 297 a.a., tyrosine recombinase XerC (RefSeq) from Shewanella loihica PV-4

 Score =  140 bits (354), Expect = 3e-38
 Identities = 106/290 (36%), Positives = 148/290 (51%), Gaps = 16/290 (5%)

Query: 16  HLSLDRRRSAHTVRAYVATAERLVAFLAEHQGQAVTAASLARLEQADLRAYLASRRVDGI 75
           +L  +R+ S HTVR Y    ER+   L E+          A +    L+A L      G+
Sbjct: 12  YLVSERQLSPHTVRNYRFELERVGELLPEN-------FIWAEVSDEQLQAVLNKLHRKGL 64

Query: 76  GNISAARELSAVRGFLKFV--GGAEARVP--QLKGPRVKRGLPRPISPDEALALAGDVAE 131
           G  S A  LSA++ F  ++   G   + P   L  P+ ++ LP+ +  D    L     E
Sbjct: 65  GPRSIALTLSALKQFCHYLLQEGYIKKDPCLNLSAPKQQKPLPKNMDLDSVTHLLS--IE 122

Query: 132 GAREDWIGARDWAVLLLLYGAGLRIGEAMGL-MGDIMPLGDTLRVTGKRGKTRLVPLLPQ 190
           G  +D +  RD A++ L Y +GLR+ E   L   DI      ++V GK  K R+VP+   
Sbjct: 123 G--DDALALRDKAIMELFYSSGLRLAELAALDTRDIASGEHQVKVMGKGSKERIVPIGRM 180

Query: 191 VRSAIEAYADQCPWSPERDQPLFRGARGGPLSAALIRRSVQGARGRLGLSDRTTPHALRH 250
             SAI+ +       P  D  LF  A+G  L+   I+  +       GL+ R  PH LRH
Sbjct: 181 ALSAIDDWLKVRSLLPCEDDALFVTAKGKRLAHRSIQARLNKWGQLQGLNARVHPHKLRH 240

Query: 251 SFATHLLGRGADLRSLQELLGHASLTSTQVYTQVDAAHLLDVYRAAHPRA 300
           SFATH+L   ADLR++QELLGHA+L++TQVYT +D  HL  VY  AHPRA
Sbjct: 241 SFATHMLESSADLRAVQELLGHANLSTTQVYTSLDFQHLAKVYDGAHPRA 290